RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TRIP11Q15643 1979 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 CNTNAP2Q9UHC6 1331 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 WDR27A2RRH5 827 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 CCDC69A6NI79 296 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 SLC38A8A6NNN8 435 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 PATE3B3GLJ2 98 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 EPN2O95208 641 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 FOSP01100 380 aaPredicted RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 ZNF806P0C7X5 589 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 CPA1P15085 419 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ARF4P18085 180 aaPredicted RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 GDI1P31150 447 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 OR1D2P34982 312 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ADD1P35611 737 aaKnown RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 LIFRP42702 1097 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 MAGEA9P43362 315 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 CXCL12P48061 93 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 GNAQP50148 359 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ZNF252P-AS1Q0IIN9 211 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 LAMTOR4Q0VGL1 99 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 PTGDRQ13258 359 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 USP41Q3LFD5 358 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 STXBP5Q5T5C0 1151 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 TTC22Q5TAA0 569 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 FAM171A1Q5VUB5 890 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 IL31Q6EBC2 164 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 PPP1R18Q6NYC8 613 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 CEP57Q86XR8 500 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 PIK3R5Q8WYR1 880 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 PGBD4Q96DM1 585 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ZFYVE19Q96K21 471 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ASB16Q96NS5 453 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 FAM126AQ9BYI3 521 aaPredicted RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 ADAM33Q9BZ11 813 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 LSG1Q9H089 658 aaKnown RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 RAB23Q9ULC3 237 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 MRPS23Q9Y3D9 190 aaKnown RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 ZFP37Q9Y6Q3 630 aaPredicted RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 MAST4O15021 2626 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ABCA7Q8IZY2 2146 aa8.06□□□□□ -1.12
SMG6-205ENST00000570659 ASCC3Q8N3C0 2202 aaKnown RBP8.06□□□□□ -1.12
SMG6-205ENST00000570659 MYO16Q9Y6X6 1858 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 C4orf47A7E2U8 309 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 HYAL3O43820 417 aaPredicted RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 SLC37A4O43826 429 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 VNN2O95498 520 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 NPTXRO95502 500 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 HNRNPA1P09651 372 aaKnown RBP eCLIP8.05□□□□□ -1.12
SMG6-205ENST00000570659 SKIP12755 728 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 TKTP29401 623 aaKnown RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 NOVA1P51513 510 aaKnown RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 PFKPQ01813 784 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 MBTD1Q05BQ5 628 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 HSP90AA2PQ14568 343 aaPredicted RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 SART3Q15020 963 aaKnown RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 ADCK5Q3MIX3 580 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 XKR3Q5GH77 459 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 LRCH2Q5VUJ6 765 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 SGMS1Q86VZ5 419 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 LONP2Q86WA8 852 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 ETNPPLQ8TBG4 499 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 ZCCHC14Q8WYQ9 949 aaKnown RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 ELSPBP1Q96BH3 223 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 CRELD1Q96HD1 420 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 CCDC136Q96JN2 1154 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 NELL2Q99435 816 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 ZMYND12Q9H0C1 365 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
SMG6-205ENST00000570659 BRD9Q9H8M2 597 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 GOLGA2P5Q9HBQ8 144 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 CEP72Q9P209 647 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 VAV3Q9UKW4 847 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 SLC12A7Q9Y666 1083 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 CDY1Q9Y6F8 540 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 TENM4Q6N022 2769 aa8.05□□□□□ -1.12
SMG6-205ENST00000570659 KIAA1549LQ6ZVL6 1849 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 NUP205Q92621 2012 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 OTOL1A6NHN0 477 aaPredicted RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 HIP1O00291 1037 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 MEFVO15553 781 aaPredicted RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 GAS7O60861 476 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 HOXA9P31269 272 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 MCM5P33992 734 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 MPLP40238 635 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 BRCC3P46736 316 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 CCR3P51677 355 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 CDR1P51861 262 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 FAM193AP78312 1265 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 TNK2Q07912 1038 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 CAPSQ13938 189 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RAB33AQ14088 237 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 NPY5RQ15761 445 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 RTN1Q16799 776 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 PFKFB3Q16875 520 aaPredicted RBP8.04□□□□□ -1.12
SMG6-205ENST00000570659 SH3PXD2AQ5TCZ1 1133 aa8.04□□□□□ -1.12
SMG6-205ENST00000570659 LIN9Q5TKA1 542 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms