RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CDT1Q9H211 546 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 PCIF1Q9H4Z3 704 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 PDZD7Q9H5P4 517 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 IL21Q9HBE4 155 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 METTL14Q9HCE5 456 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TOPORSQ9NS56 1045 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 RBAKQ9NYW8 714 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 ARMCX3Q9UH62 379 aaPredicted RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 TBX21Q9UL17 535 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 ST3GAL5Q9UNP4 418 aa7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 NOC2LQ9Y3T9 749 aaKnown RBP7.17□□□□□ -1.26
CTDNEP1-204ENST00000570484 GOLGA8IPA6NC78 632 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZNF233A6NK53 670 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 GOLGA8JA6NMD2 632 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 ANKRD63C9JTQ0 380 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 CBFA2T2O43439 604 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 EXTL3O43909 919 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 STX10O60499 249 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 PFKMP08237 780 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 IQCF3P0C7M6 154 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 SKIP12755 728 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 CYP2C18P33260 490 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 HOXD13P35453 343 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCL23P55773 120 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 OSTNP61366 133 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 PPP2R3AQ06190 1150 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 IQCB1Q15051 598 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 FKBP15Q5T1M5 1219 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 LRRC55Q6ZSA7 311 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM43BQ6ZT52 329 aaPredicted RBP7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 INTS8Q75QN2 995 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC9A9Q8IVB4 645 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 THNSL1Q8IYQ7 743 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 RNF169Q8NCN4 708 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 EEF2KMTQ96G04 330 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 SCLYQ96I15 445 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 RPS6KC1Q96S38 1066 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 DUSP9Q99956 384 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 APOL6Q9BWW8 343 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 RBSNQ9H1K0 784 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 IKZF4Q9H2S9 585 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 RPF1Q9H9Y2 349 aaKnown RBP7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 ERVK-5Q9HDB9 667 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 CHST12Q9NRB3 414 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 FANCLQ9NW38 375 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 PADI3Q9ULW8 664 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 USP20Q9Y2K6 914 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 UMODL1Q5DID0 1318 aa7.16□□□□□ -1.26
CTDNEP1-204ENST00000570484 A0A0B4J269 797 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 A0A1B0GUA9 196 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 GOLGA6L6A8MZA4 724 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CFAP99D6REC4 459 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 KIAA0355O15063 1070 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 MAPK13O15264 365 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 N4BP1O75113 896 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 AKAP3O75969 853 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 IL18RAPO95256 599 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 TIMP1P01033 207 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 EDN1P05305 212 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CLTAP09496 248 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 DLATP10515 647 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ACTN1P12814 892 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 PROZP22891 400 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADSSP30520 456 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 GRM5P41594 1212 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 MRE11P49959 708 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CETN1Q12798 172 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 BFSP1Q12934 665 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 PPIGQ13427 754 aaKnown RBP eCLIP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 SURF1Q15526 300 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 MAN2A1Q16706 1144 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 UVSSAQ2YD98 709 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 MSS51Q4VC12 460 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 TCP11X2Q5H9J9 407 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CDKAL1Q5VV42 579 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 EEF1DP3Q658K8 133 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 SLC39A4Q6P5W5 647 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 FILIP1Q7Z7B0 1213 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 DEFB128Q7Z7B8 93 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 UBE2Q1Q7Z7E8 422 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 GAS2L3Q86XJ1 694 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CBWD2Q8IUF1 395 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZC3H3Q8IXZ2 948 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM160A2Q8N612 972 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 DPF3Q92784 378 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 CCDC127Q96BQ5 260 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 PGBD4Q96DM1 585 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ZBTB45Q96K62 511 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ACAP3Q96P50 834 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 ADAM2Q99965 735 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 USB1Q9BQ65 265 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 LBHD1Q9BQE6 289 aaPredicted RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 WNT8AQ9H1J5 351 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 NXF3Q9H4D5 531 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 MMRN2Q9H8L6 949 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 GRPEL1Q9HAV7 217 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 C1orf112Q9NSG2 853 aa7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 SAMSN1Q9NSI8 373 aaKnown RBP7.15□□□□□ -1.26
CTDNEP1-204ENST00000570484 FAM105AQ9NUU6 356 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms