RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CROTQ9UKG9 612 aa4.58□□□□□ -1.68
UBR1-211ENST00000569971 CDC42EP3Q9UKI2 254 aa4.58□□□□□ -1.68
UBR1-211ENST00000569971 STXBP5LQ9Y2K9 1186 aa4.58□□□□□ -1.68
UBR1-211ENST00000569971 RPTORQ8N122 1335 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 CFAP69A5D8W1 941 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 MATN3O15232 486 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 LY86O95711 162 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 HNRNPLP14866 589 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR1-211ENST00000569971 ZKSCAN1P17029 563 aaPredicted RBP4.57□□□□□ -1.68
UBR1-211ENST00000569971 PEX2P28328 305 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 CNR2P34972 360 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 CACNB3P54284 484 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 ZXDAP98168 799 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 MAP3K12Q12852 859 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 FAM83BQ5T0W9 1011 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 C1orf228Q6PIY5 440 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 OTOP2Q7RTS6 562 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 TTC7BQ86TV6 843 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.57□□□□□ -1.68
UBR1-211ENST00000569971 NSUN6Q8TEA1 469 aaKnown RBP4.57□□□□□ -1.68
UBR1-211ENST00000569971 LRTOMTQ8WZ04 291 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 RGMAQ96B86 450 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 PAWRQ96IZ0 340 aaKnown RBP4.57□□□□□ -1.68
UBR1-211ENST00000569971 CDK5RAP3Q96JB5 506 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 CLPTM1LQ96KA5 538 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 CCDC138Q96M89 665 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 NOX5Q96PH1 765 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 DMRTA2Q96SC8 542 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 C11orf84Q9BUA3 381 aaPredicted RBP4.57□□□□□ -1.68
UBR1-211ENST00000569971 OSBPL6Q9BZF3 934 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 PLCB1Q9NQ66 1216 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 POLR3BQ9NW08 1133 aaPredicted RBP4.57□□□□□ -1.68
UBR1-211ENST00000569971 SRRDQ9UH36 339 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 DMTF1Q9Y222 760 aa4.57□□□□□ -1.68
UBR1-211ENST00000569971 WDR62O43379 1518 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 NCOA2Q15596 1464 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 MYOM3Q5VTT5 1437 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 A0A088AWK7 358 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 A0A0G2JNJ9 132 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 FAM171A2A8MVW0 826 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 AKAP8O43823 692 aaKnown RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 PLATP00750 562 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 KNG1P01042 644 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 FOSP01100 380 aaPredicted RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 RPLP2P05387 115 aaKnown RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 PIK3CBP42338 1070 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 SLC6A9P48067 706 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 HK3P52790 923 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 SMAD4Q13485 552 aaKnown RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 ZRSR2Q15696 482 aaKnown RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 MAN2A1Q16706 1144 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 GRAMD1BQ3KR37 738 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 KHDC1Q4VXA5 237 aaKnown RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 PPP4R3AQ6IN85 833 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 ERAP2Q6P179 960 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 XRRA1Q6P2D8 792 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 FAM180AQ6UWF9 173 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 Q6ZVL8 140 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 MAEAQ7L5Y9 396 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 ZNF761Q86XN6 746 aaPredicted RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 LINC00482Q8N8I6 264 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 ACRBPQ8NEB7 543 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 PIK3C3Q8NEB9 887 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 HOXB13Q92826 284 aaPredicted RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 EVI5LQ96CN4 794 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 WDR92Q96MX6 357 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 KRTAP3-1Q9BYR8 98 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 L2HGDHQ9H9P8 463 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 RSAD1Q9HA92 442 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.56□□□□□ -1.68
UBR1-211ENST00000569971 Q9UFV3 132 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 SIK3Q9Y2K2 1263 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 PCDHA3Q9Y5H8 950 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 MAPKBP1O60336 1514 aa4.56□□□□□ -1.68
UBR1-211ENST00000569971 H0Y858 1186 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 H3BUI4 141 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 SLC16A6O15403 523 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 MGEA5O60502 916 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 PRAMEF4O60810 478 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 FSBPO95073 299 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 CYP1A1P04798 512 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 LTA4HP09960 611 aaKnown RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 SETSIPP0DME0 302 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 GAAP10253 952 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 RPL13P26373 211 aaKnown RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 IL12RB1P42701 662 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 TRAPPC10P48553 1259 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 STAT5BP51692 787 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 KCNQ1P51787 676 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 MLLT6P55198 1093 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 GPSM2P81274 684 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 CHAF1AQ13111 956 aaPredicted RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 TARDBPQ13148 414 aaKnown RBP eCLIP4.55□□□□□ -1.68
UBR1-211ENST00000569971 NOGQ13253 232 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 IFIT5Q13325 482 aaKnown RBP4.55□□□□□ -1.68
UBR1-211ENST00000569971 FAM26FQ5R3K3 315 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 THEMIS2Q5TEJ8 643 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 TMEM200BQ69YZ2 307 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 APOA5Q6Q788 366 aa4.55□□□□□ -1.68
UBR1-211ENST00000569971 HEATR3Q7Z4Q2 680 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms