RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 DUSP10Q9Y6W6 482 aa11.83□□□□□ -0.52
PDXDC1-216ENST00000569715 A0A087X0T9 212 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 FOXN3O00409 490 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 TSPAN1O60635 241 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 LCA5LO95447 670 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 VNN1O95497 513 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 C4BPAP04003 597 aaKnown RBP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 MYCNP04198 464 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 FAM228BP0C875 321 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 ZACNQ401N2 412 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 FAM212AQ96EL1 285 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 OSMRQ99650 979 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 SMIM35A0A1B0GVV1 85 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 ADAMTS4O75173 837 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 RARBP10826 455 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 MAP2K2P36507 400 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 STAT1P42224 750 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 ENPEPQ07075 957 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 DNAAF5Q86Y56 855 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 TMEM130Q8N3G9 435 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 PPM1KQ8N3J5 372 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 TATDN2Q93075 761 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 ADAMTS1Q9UHI8 967 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 PRKCIP41743 596 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 KRT83P78385 493 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 BIRC3Q13489 604 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 ZNF410Q86VK4 478 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 HELQQ8TDG4 1101 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 JAKMIP2Q96AA8 810 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 KATNAL1Q9BW62 490 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 GUCA1BQ9UMX6 200 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 PCDHA13Q9Y5I0 950 aa11.82□□□□□ -0.52
PDXDC1-216ENST00000569715 C17orf102A2RUQ5 167 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 KIF2AO00139 706 aaPredicted RBP11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 HLA-DRAP01903 254 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 CXCL8P10145 99 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 HOXC8P31273 242 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 SPA17Q15506 151 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 SPOPLQ6IQ16 392 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 C7orf31Q8N865 590 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 TMEM40Q8WWA1 233 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 XPNPEP3Q9NQH7 507 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 FAM170AA1A519 330 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 IPO7O95373 1038 aaKnown RBP11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 VAV2P52735 878 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 KIF18AQ8NI77 898 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 DHX38Q92620 1227 aaKnown RBP11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 ARID3AQ99856 593 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 MTMR12Q9C0I1 747 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 PIK3CAP42336 1068 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 NBPF20Q3BBV1 942 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 CCDC122Q5T0U0 273 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 EFCAB13Q8IY85 973 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 PRIMPOLQ96LW4 560 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 MTG1Q9BT17 334 aaPredicted RBP11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 ACP6Q9NPH0 428 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 TRIP11Q15643 1979 aa11.81□□□□□ -0.52
PDXDC1-216ENST00000569715 RIOK3O14730 519 aaKnown RBP11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 ERLIN2O94905 339 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 FERP16591 822 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 RFX1P22670 979 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC18A3Q16572 532 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 ZNF569Q5MCW4 686 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 NT5C1BQ96P26 610 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 PACSIN1Q9BY11 444 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 HMGCRP04035 888 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 PAXBP1Q9Y5B6 917 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 CITO14578 2027 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 UMODL1Q5DID0 1318 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 MAP3K21Q5TCX8 1036 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 LNX1Q8TBB1 728 aaPredicted RBP11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 SLC20A1Q8WUM9 679 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 ZNF296Q8WUU4 475 aaPredicted RBP11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 WNT8BQ93098 351 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 APOBEC3GQ9HC16 384 aaKnown RBP11.8□□□□□ -0.52
PDXDC1-216ENST00000569715 MACROD2A1Z1Q3 448 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 KIF5CO60282 957 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 ASGR1P07306 291 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 STAG3L1P0CL83 205 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 HOXA11P31270 313 aaPredicted RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 USP8P40818 1118 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 MAGEA1P43355 309 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 GDF6Q6KF10 455 aaPredicted RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 WDR49Q8IV35 697 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 RAET1EQ8TD07 263 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 GCOM2Q9BZD3 368 aaPredicted RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 SPC25Q9HBM1 224 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 A0A1B0GUA9 196 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.522e-13■□□□□ 8.8
PDXDC1-216ENST00000569715 MCF2P10911 925 aa11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 DARSP14868 501 aaKnown RBP11.79□□□□□ -0.52
PDXDC1-216ENST00000569715 NKX3-2P78367 333 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms