RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 POLR3FQ9H1D9 316 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GDF3Q9NR23 364 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 RAB20Q9NX57 234 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SEPT9Q9UHD8 586 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NOCTQ9UK39 431 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 AMFRQ9UKV5 643 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SLC45A1Q9Y2W3 748 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 TELO2Q9Y4R8 837 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 A0A0B4J269 797 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 RBM47A0AV96 593 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GOLGA8IPA6NC78 632 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GOLGA8JA6NMD2 632 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC188H7C350 402 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 K7ERI5 159 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ADCY3O60266 1144 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 FTCDO95954 541 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 FTLP02792 175 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 C4BPAP04003 597 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CYP1A2P05177 515 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 UBA1P22314 1058 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 SLC26A2P50443 739 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 POLGP54098 1239 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 BPIFB4P59827 614 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GPC5P78333 572 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 IRX3P78415 501 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CDR2Q01850 454 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 POU5F1Q01860 360 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 STRN3Q13033 797 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GPS2Q13227 327 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 NNTQ13423 1086 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CASP8Q14790 479 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ENOX2Q16206 610 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 PPP2R5EQ16537 467 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ARHGAP44Q17R89 818 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 Q3C1V9 767 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ZACNQ401N2 412 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 MTERF2Q49AM1 385 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CELF3Q5SZQ8 465 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 EMBQ6PCB8 327 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CRELD2Q6UXH1 353 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GADL1Q6ZQY3 521 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ARMC9Q7Z3E5 817 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 PEX26Q7Z412 305 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 NCAPG2Q86XI2 1143 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF677Q86XU0 584 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ARHGEF19Q8IW93 802 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 RHOT2Q8IXI1 618 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 IFT20Q8IY31 132 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 METTL13Q8N6R0 699 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 USP38Q8NB14 1042 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 SLC35G2Q8TBE7 412 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ASAP3Q8TDY4 903 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 TCP11Q8WWU5 503 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 SLC7A3Q8WY07 619 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CTNNBL1Q8WYA6 563 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 POMGNT1Q8WZA1 660 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 DDX1Q92499 740 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF516Q92618 1163 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 FGD4Q96M96 766 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 NT5C1BQ96P26 610 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 PCDHB18PQ96TA0 734 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 GPR20Q99678 358 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 JPH2Q9BR39 696 aaPredicted RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ACBD3Q9H3P7 528 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ELP3Q9H9T3 547 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 RRAGCQ9HB90 399 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 MED4Q9NPJ6 270 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 DMGDHQ9UI17 866 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 NOVA2Q9UNW9 492 aaKnown RBP5.8□□□□□ -1.48
SF3B3-213ENST00000569687 CNTN6Q9UQ52 1028 aa5.8□□□□□ -1.48
SF3B3-213ENST00000569687 ADGRA3Q8IWK6 1321 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ADGRA2Q96PE1 1338 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 A0A0U1RQG5 324 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ASB14A6NK59 587 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 HNRNPDLO14979 420 aaKnown RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ASAP2O43150 1006 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CYP26A1O43174 497 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 BUB1BO60566 1050 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 LRRN2O75325 713 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SGPL1O95470 568 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CYP11B1P15538 503 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CXCR5P32302 372 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 LIG4P49917 911 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SOX10P56693 466 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 TNNC1P63316 161 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 MAP2K1Q02750 393 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 POU5F1BQ06416 359 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 DMTNQ08495 405 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 C2orf54Q08AI8 447 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 NR1H3Q13133 447 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SNAPC2Q13487 334 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 MXD4Q14582 209 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 KCTD2Q14681 263 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 SURF1Q15526 300 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ALS2CLQ60I27 953 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 MAP1SQ66K74 1059 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 CDCA2Q69YH5 1023 aaPredicted RBP5.79□□□□□ -1.48
SF3B3-213ENST00000569687 ACAD10Q6JQN1 1059 aa5.79□□□□□ -1.48
SF3B3-213ENST00000569687 C11orf63Q6NUN7 778 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms