RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 SLC10A6Q3KNW5 377 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.48■■□□□ 1.67
RAB40C-212ENST00000569575 URGCPQ8TCY9 931 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 SNX27Q96L92 541 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 SLC38A7Q9NVC3 462 aa25.48■■□□□ 1.67
RAB40C-212ENST00000569575 MAGEC2Q9UBF1 373 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-212ENST00000569575 ARMCX3Q9UH62 379 aaPredicted RBP25.48■■□□□ 1.67
RAB40C-212ENST00000569575 PDE4DIPQ5VU43 2346 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 EEF1GP26641 437 aaKnown RBP25.47■■□□□ 1.67
RAB40C-212ENST00000569575 CLDN10P78369 228 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 CYP24A1Q07973 514 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 CBWD2Q8IUF1 395 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 CEP120Q8N960 986 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 ANKRD20A12PQ8NF67 263 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 CACTINQ8WUQ7 758 aaKnown RBP25.47■■□□□ 1.67
RAB40C-212ENST00000569575 FNBP1Q96RU3 617 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 RPS6KC1Q96S38 1066 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 HES2Q9Y543 173 aa25.47■■□□□ 1.67
RAB40C-212ENST00000569575 GOLGA8IPA6NC78 632 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 GOLGA8JA6NMD2 632 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 OFD1O75665 1012 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 DGKIO75912 1065 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 OSTNP61366 133 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 IQCB1Q15051 598 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 BORCS6Q96GS4 357 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 RNF39Q9H2S5 420 aa25.46■■□□□ 1.67
RAB40C-212ENST00000569575 ARL5CA6NH57 179 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 GOLGA6L19H0YKK7 550 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 GJB5O95377 273 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 CXCL8P10145 99 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 CYP3A5P20815 502 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 AKAP5P24588 427 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 GTF2H1P32780 548 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 TNFSF9P41273 254 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 CASP4P49662 377 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 BFSP1Q12934 665 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 CCDC40Q4G0X9 1142 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 WDR49Q8IV35 697 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 RDH13Q8NBN7 331 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 RNF169Q8NCN4 708 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 PARD3BQ8TEW8 1205 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 RNPC3Q96LT9 517 aaKnown RBP25.45■■□□□ 1.66
RAB40C-212ENST00000569575 INSL6Q9Y581 213 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 RALGAPA2Q2PPJ7 1873 aa25.45■■□□□ 1.66
RAB40C-212ENST00000569575 A0A1W2PPC1 479 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 THP07101 528 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 ATP2A2P16615 1042 aaKnown RBP25.44■■□□□ 1.66
RAB40C-212ENST00000569575 VAMP7P51809 220 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 GRIK3Q13003 919 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 NCAPHQ15003 741 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 NOMO2Q5JPE7 1267 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 CDKAL1Q5VV42 579 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 DHX40Q8IX18 779 aaKnown RBP25.44■■□□□ 1.66
RAB40C-212ENST00000569575 CMTR2Q8IYT2 770 aaKnown RBP25.44■■□□□ 1.66
RAB40C-212ENST00000569575 AOPEPQ8N6M6 819 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 ZNF689Q96CS4 500 aaPredicted RBP25.44■■□□□ 1.66
RAB40C-212ENST00000569575 APOL6Q9BWW8 343 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 CBX8Q9HC52 389 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 CEP290O15078 2479 aa25.44■■□□□ 1.66
RAB40C-212ENST00000569575 LACTBL1A8MY62 500 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 PAX3P23760 479 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 DEFB103AP81534 67 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 HTRA4P83105 476 aaPredicted RBP25.43■■□□□ 1.66
RAB40C-212ENST00000569575 SHHQ15465 462 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 SEZ6Q53EL9 994 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 ZBTB41Q5SVQ8 909 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 HERC6Q8IVU3 1022 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 TMEM192Q8IY95 271 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 LPPQ93052 612 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 GAD1Q99259 594 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 RAD9AQ99638 391 aa25.43■■□□□ 1.66
RAB40C-212ENST00000569575 UBQLN1Q9UMX0 589 aaKnown RBP25.43■■□□□ 1.66
RAB40C-212ENST00000569575 SMIM28A0A1B0GU29 152 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 TPM2P07951 284 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 MLH1P40692 756 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 ZBTB6Q15916 424 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 DUOXA2Q1HG44 320 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 CLLU1OSQ5K130 101 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 LRRC43Q8N309 656 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 UROC1Q96N76 676 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 CASD1Q96PB1 797 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 CGRRF1Q99675 332 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 RNF19AQ9NV58 838 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 FANCLQ9NW38 375 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 CXXC1Q9P0U4 656 aaPredicted RBP25.42■■□□□ 1.66
RAB40C-212ENST00000569575 COL4A6Q14031 1691 aa25.42■■□□□ 1.66
RAB40C-212ENST00000569575 LRRC10BA6NIK2 292 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 PMM2O15305 246 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 ZNF18P17022 549 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 TMEM132DQ14C87 1099 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 IRF2BP1Q8IU81 584 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 TRIM59Q8IWR1 403 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 GSTCDQ8NEC7 633 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 ZSWIM2Q8NEG5 633 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 DDX27Q96GQ7 796 aaKnown RBP25.41■■□□□ 1.66
RAB40C-212ENST00000569575 CNOT6LQ96LI5 555 aaKnown RBP25.41■■□□□ 1.66
RAB40C-212ENST00000569575 PPP1R10Q96QC0 940 aaKnown RBP25.41■■□□□ 1.66
RAB40C-212ENST00000569575 ZBED2Q9BTP6 218 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 PDE11AQ9HCR9 933 aa25.41■■□□□ 1.66
RAB40C-212ENST00000569575 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms