RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 EMILIN2Q9BXX0 1053 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 MRPL17Q9NRX2 175 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 MARCH5Q9NX47 278 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 USP25Q9UHP3 1055 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 ODF2LQ9ULJ1 636 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 TCF20Q9UGU0 1960 aaKnown RBP15.85■□□□□ 0.13
COMMD4-225ENST00000569245 ZMYM2Q9UBW7 1377 aa15.85■□□□□ 0.13
COMMD4-225ENST00000569245 A0A087X0B3 334 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 F8W810 466 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 KINO60870 393 aaKnown RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 TADA2AO75478 443 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 URODP06132 367 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 MAPTP10636 758 aaKnown RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 TUSC3Q13454 348 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 PTPN14Q15678 1187 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 SMAD2Q15796 467 aaKnown RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 E2F4Q16254 413 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 CCDC183Q5T5S1 534 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 ANKRD54Q6NXT1 300 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 TMEM184AQ6ZMB5 413 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 ELOA2Q8IYF1 753 aaPredicted RBP15.84■□□□□ 0.13
COMMD4-225ENST00000569245 IQUBQ8NA54 791 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 SMRP1Q8NCR6 262 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 PANK2Q9BZ23 570 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 CDT1Q9H211 546 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 CLSTN2Q9H4D0 955 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 PARVGQ9HBI0 331 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 TMEM63CQ9P1W3 806 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 ANKFY1Q9P2R3 1169 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 PRKAG3Q9UGI9 489 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 SSX2IPQ9Y2D8 614 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
COMMD4-225ENST00000569245 PTGESO14684 152 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 SOD2P04179 222 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 MCF2P10911 925 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 KLRC2P26717 231 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 GRM5P41594 1212 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 HSP90AA2PQ14568 343 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-225ENST00000569245 MPZL3Q6UWV2 235 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 KRBA2Q6ZNG9 492 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 TAS1R1Q7RTX1 841 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 HAUS6Q7Z4H7 955 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 ADHFE1Q8IWW8 467 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 ACAP3Q96P50 834 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 CXCL16Q9H2A7 254 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 PTPRHQ9HD43 1115 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 TOPORSQ9NS56 1045 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-225ENST00000569245 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 STK17AQ9UEE5 414 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 USP15Q9Y4E8 981 aaPredicted RBP15.83■□□□□ 0.12
COMMD4-225ENST00000569245 IRAK3Q9Y616 596 aa15.83■□□□□ 0.12
COMMD4-225ENST00000569245 SPDYE4A6NLX3 237 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 K7ENM7 598 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 ACTN4O43707 911 aaKnown RBP15.82■□□□□ 0.12
COMMD4-225ENST00000569245 TOM1L1O75674 476 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 SLFN14P0C7P3 912 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 HOXB8P17481 243 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-225ENST00000569245 STAT6P42226 847 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 GLUD2P49448 558 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 ZP2Q05996 745 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 KCNC3Q14003 757 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 GLRA4Q5JXX5 417 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 SV2BQ7L1I2 683 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 DYMQ7RTS9 669 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 PPFIBP1Q86W92 1011 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 PDILTQ8N807 584 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 CEP120Q8N960 986 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 HASPINQ8TF76 798 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 DHX58Q96C10 678 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 ZBTB45Q96K62 511 aaPredicted RBP15.82■□□□□ 0.12
COMMD4-225ENST00000569245 POP1Q99575 1024 aaKnown RBP15.82■□□□□ 0.12
COMMD4-225ENST00000569245 HERC2P3Q9BVR0 1158 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 NUP62CLQ9H1M0 184 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 CUEDC2Q9H467 287 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 CD320Q9NPF0 282 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 ADAM28Q9UKQ2 775 aa15.82■□□□□ 0.12
COMMD4-225ENST00000569245 CLDN3O15551 220 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 CNPP09543 421 aaKnown RBP15.81■□□□□ 0.12
COMMD4-225ENST00000569245 SCP2P22307 547 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 LIG4P49917 911 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 ZNF131P52739 623 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 NCKAP1LP55160 1127 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
COMMD4-225ENST00000569245 ATG2AQ2TAZ0 1938 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 USP41Q3LFD5 358 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 CES5AQ6NT32 575 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 KANK3Q6NY19 840 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 FUT10Q6P4F1 479 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 ZPBP2Q6X784 338 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 B3GALT6Q96L58 329 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 KLHL5Q96PQ7 755 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 PAAF1Q9BRP4 392 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 ANP32EQ9BTT0 268 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 GPR62Q9BZJ7 368 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 MAGEF1Q9HAY2 307 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 SERTAD1Q9UHV2 236 aa15.81■□□□□ 0.12
COMMD4-225ENST00000569245 TBX20Q9UMR3 447 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms