RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 EXOC3O60645 756 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 NPTXRO95502 500 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 FGFR1OPO95684 399 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 LDHAP00338 332 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 HARSP12081 509 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 CSF2RAP15509 400 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 ZSCAN20P17040 1043 aaPredicted RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 GRM5P41594 1212 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 MATR3P43243 847 aaKnown RBP eCLIP11.37□□□□□ -0.59
CDH3-210ENST00000569117 MARSP56192 900 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 ADAM9Q13443 819 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 TPD52L1Q16890 204 aaPredicted RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 CDKAL1Q5VV42 579 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 CNKSR3Q6P9H4 555 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 LUZP1Q86V48 1076 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 CEP120Q8N960 986 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 DBF4BQ8NFT6 615 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 SAAL1Q96ER3 474 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 TCHPQ9BT92 498 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 SRRTQ9BXP5 876 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 EIF2AQ9BY44 585 aaKnown RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 TRIM6Q9C030 488 aaPredicted RBP11.37□□□□□ -0.59
CDH3-210ENST00000569117 HSD3B7Q9H2F3 369 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 PCIF1Q9H4Z3 704 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 KIAA1586Q9HCI6 787 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 C1orf112Q9NSG2 853 aa11.37□□□□□ -0.59
CDH3-210ENST00000569117 TTC3P53804 2025 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 C9IYK1 514 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 RBAK-RBAKDNI3L0D1 243 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 AKAP3O75969 853 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 GNA14O95837 355 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 ADRB2P07550 413 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 EPB41P11171 864 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 SKIP12755 728 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 ZNF18P17022 549 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 PSMC2P35998 433 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 CASP4P49662 377 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 POU5F1Q01860 360 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 FPGSQ05932 587 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 PPIGQ13427 754 aaKnown RBP eCLIP11.36□□□□□ -0.59
CDH3-210ENST00000569117 SNRNP35Q16560 246 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 TCTN1Q2MV58 587 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 PROX2Q3B8N5 592 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 ZBTB41Q5SVQ8 909 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 CEP135Q66GS9 1140 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 FILIP1Q7Z7B0 1213 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 DEFB128Q7Z7B8 93 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 IRF2BP1Q8IU81 584 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 FAM114A1Q8IWE2 563 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 BRSK2Q8IWQ3 736 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 FAM186BQ8IYM0 893 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 PRR7Q8TB68 274 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 EPS8L1Q8TE68 723 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 EEF2KMTQ96G04 330 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 CNOT6LQ96LI5 555 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 UCN2Q96RP3 112 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 ADAM2Q99965 735 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 FAM213AQ9BRX8 229 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 NXF3Q9H4D5 531 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 IL23AQ9NPF7 189 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 RGS18Q9NS28 235 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 SAMSN1Q9NSI8 373 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 FAM105AQ9NUU6 356 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 CPSF3Q9UKF6 684 aaKnown RBP11.36□□□□□ -0.59
CDH3-210ENST00000569117 FRMD4BQ9Y2L6 1034 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 IPPQ9Y573 584 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
CDH3-210ENST00000569117 A0A0U1RQF3 1178 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 GOLGA8IPA6NC78 632 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 GOLGA8JA6NMD2 632 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 GOLGA6L19H0YKK7 550 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ZNF623O75123 536 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 CLTAP09496 248 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ATF7P17544 494 aaPredicted RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 EEF1GP26641 437 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 SOX11P35716 441 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ACOT2P49753 483 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 TPM4P67936 248 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ENPEPQ07075 957 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 SPAG1Q07617 926 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 BFSP1Q12934 665 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ENOX2Q16206 610 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 THNSL1Q8IYQ7 743 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 HACE1Q8IYU2 909 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 RPUSD2Q8IZ73 545 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 SMG8Q8ND04 991 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 RNF214Q8ND24 703 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 ZSWIM2Q8NEG5 633 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 DPF3Q92784 378 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 BADQ92934 168 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 BORCS6Q96GS4 357 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 CCDC94Q9BW85 323 aaPredicted RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 RBSNQ9H1K0 784 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 VRTNQ9H8Y1 702 aa11.35□□□□□ -0.59
CDH3-210ENST00000569117 METTL14Q9HCE5 456 aaKnown RBP11.35□□□□□ -0.59
CDH3-210ENST00000569117 FANCLQ9NW38 375 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms