RNA–Protein interactions for RNA: ENST00000568507.5

CCNDBP1-213, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-213ENST00000568507 GBP2P32456 591 aaPredicted RBP16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 SMTNP53814 917 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 OSTNP61366 133 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 NHLH1Q02575 133 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 RAD51AP2Q09MP3 1159 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 STRN3Q13033 797 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 NAB2Q15742 525 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 ZNF568Q3ZCX4 644 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 GLRA4Q5JXX5 417 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 RTP2Q5QGT7 225 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 HYIQ5T013 277 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 ARL6IP4Q66PJ3 421 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 PDXDC1Q6P996 788 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 DCLRE1AQ6PJP8 1040 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 UROC1Q96N76 676 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 RHOBTB2Q9BYZ6 727 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 CXCL16Q9H2A7 254 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 WDR6Q9NNW5 1121 aaKnown RBP16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 TECTAO75443 2155 aa16.42■□□□□ 0.22
CCNDBP1-213ENST00000568507 SLC16A4O15374 487 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 B3GAT3O94766 335 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 GUCY2CP25092 1073 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 GRM5P41594 1212 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 PTPN5P54829 565 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 PSMD5Q16401 504 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 IER5LQ5T953 404 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 LILRA6Q6PI73 481 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 ALYREFQ86V81 257 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 SYT2Q8N9I0 419 aaPredicted RBP16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 PIK3R5Q8WYR1 880 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 PNMA5Q96PV4 448 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 TARS2Q9BW92 718 aaKnown RBP16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 CDT1Q9H211 546 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 ZDHHC7Q9NXF8 308 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 ARHGAP28Q9P2N2 729 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 CLUHO75153 1309 aa16.41■□□□□ 0.22
CCNDBP1-213ENST00000568507 TRAPPC3O43617 180 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PLA2G4BP0C869 781 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PLS3P13797 630 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 AVPR2P30518 371 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 UBA7P41226 1012 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 CLCNKBP51801 687 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 MAPK7Q13164 816 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 LIN9Q5TKA1 542 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 SPIRE2Q8WWL2 714 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 CALML4Q96GE6 196 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 AK8Q96MA6 479 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 ACAP3Q96P50 834 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PPP1R10Q96QC0 940 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 NTPCRQ9BSD7 190 aaKnown RBP16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PRKD2Q9BZL6 878 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 KCNK12Q9HB15 430 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 PTPRHQ9HD43 1115 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 KCND2Q9NZV8 630 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 MUC6Q6W4X9 2439 aa16.4■□□□□ 0.22
CCNDBP1-213ENST00000568507 SMIM28A0A1B0GU29 152 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 BMP15O95972 392 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 PDGFBP01127 241 aaPredicted RBP16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 MCF2P10911 925 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 HARSP12081 509 aaKnown RBP16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 TDGQ13569 410 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 MPZL3Q6UWV2 235 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 TAS1R3Q7RTX0 852 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 CEP120Q8N960 986 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 PRSS33Q8NF86 280 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 ZNF707Q96C28 371 aaPredicted RBP16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 CLSTN3Q9BQT9 956 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 MFSD1Q9H3U5 465 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 SLC38A7Q9NVC3 462 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 IGSF9Q9P2J2 1179 aa16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 TDRD15B5MCY1 1934 aaKnown RBP16.39■□□□□ 0.21
CCNDBP1-213ENST00000568507 TMEM189-UBE2V1I3L0A0 370 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 SLC26A4O43511 780 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 ZMYND10O75800 440 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 MATR3P43243 847 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 SLC12A3P55017 1021 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 VCPP55072 806 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 UPP1Q16831 310 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 PPM1LQ5SGD2 360 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 DDX27Q96GQ7 796 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 LARSQ9P2J5 1176 aaKnown RBP16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 H0YCG3 227 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 TOM1L1O75674 476 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 FGFR3P22607 806 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 PROZP22891 400 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 TMEM119Q4V9L6 283 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 ALKAL1Q6UXT8 129 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 TMEM161BQ8NDZ6 487 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 BICD1Q96G01 975 aa16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 ZBTB45Q96K62 511 aaPredicted RBP16.38■□□□□ 0.21
CCNDBP1-213ENST00000568507 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms