RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CBWD5Q5RIA9 395 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 PRAMEF19Q5SWL8 479 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 CCDC122Q5T0U0 273 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 SMYD5Q6GMV2 418 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 SLC39A4Q6P5W5 647 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 RDH13Q8NBN7 331 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 PARD3BQ8TEW8 1205 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 COPS5Q92905 334 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 NFKBIZQ9BYH8 718 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 TMEM8AQ9HCN3 771 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 YBX2Q9Y2T7 364 aaKnown RBP15.82■□□□□ 0.12
COMMD4-221ENST00000567935 COQ4Q9Y3A0 265 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 FHOD1Q9Y613 1164 aa15.82■□□□□ 0.12
COMMD4-221ENST00000567935 ZBTB42B2RXF5 422 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 TISP43B9A030 160 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 CTIFO43310 598 aaKnown RBP15.81■□□□□ 0.12
COMMD4-221ENST00000567935 TLL1O43897 1013 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 TRIM49P0CI25 452 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 TRIM49CP0CI26 452 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 MARK3P27448 753 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 NHLH1Q02575 133 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 EPC2Q52LR7 807 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 OLFML2BQ68BL8 750 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 KRT39Q6A163 491 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 TRIM50Q86XT4 487 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 CBWD2Q8IUF1 395 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 PRPF31Q8WWY3 499 aaKnown RBP15.81■□□□□ 0.12
COMMD4-221ENST00000567935 MRPL4Q9BYD3 311 aaKnown RBP15.81■□□□□ 0.12
COMMD4-221ENST00000567935 IFIH1Q9BYX4 1025 aaKnown RBP15.81■□□□□ 0.12
COMMD4-221ENST00000567935 MSRAQ9UJ68 235 aa15.81■□□□□ 0.12
COMMD4-221ENST00000567935 A0A1W2PQ45 241 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-221ENST00000567935 A0A1W2PQY0 241 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 CTAGE9A4FU28 777 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 PJA2O43164 708 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 ZC3H11AO75152 810 aaKnown RBP eCLIP15.8■□□□□ 0.12
COMMD4-221ENST00000567935 SLU7O95391 586 aaKnown RBP15.8■□□□□ 0.12
COMMD4-221ENST00000567935 TIMP1P01033 207 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 ADRB2P07550 413 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 ACTN1P12814 892 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 SOX5P35711 763 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 CLDN10P78369 228 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 LAMTOR4Q0VGL1 99 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 PSMD6Q15008 389 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 RAB30Q15771 203 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 SLC18A3Q16572 532 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 MAPK6Q16659 721 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 ZNF569Q5MCW4 686 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 C1orf220Q5T0J3 134 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 IQCEQ6IPM2 695 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 IRF2BP2Q7Z5L9 587 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 AFG1LQ8WV93 481 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 SUCLA2Q9P2R7 463 aaPredicted RBP15.8■□□□□ 0.12
COMMD4-221ENST00000567935 AGO2Q9UKV8 859 aaKnown RBP15.8■□□□□ 0.12
COMMD4-221ENST00000567935 PCDHA13Q9Y5I0 950 aa15.8■□□□□ 0.12
COMMD4-221ENST00000567935 A0A0B4J269 797 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 F8VZ95 297 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 PI4K2BG5E9Z4 385 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 ACRP10323 421 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 TMOD1P28289 359 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 MAGEA1P43355 309 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 AP3M2P53677 418 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 PPP3CAQ08209 521 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 SURF1Q15526 300 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 DGKDQ16760 1214 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 MFSD5Q6N075 450 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 IFNLR1Q8IU57 520 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-221ENST00000567935 OR6J1Q8NGC5 347 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 LMO3Q8TAP4 145 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 HERVK_113Q902F9 699 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 SAAL1Q96ER3 474 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 WDR24Q96S15 920 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 TMEM117Q9H0C3 514 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 CCDC113Q9H0I3 377 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 SLC28A3Q9HAS3 691 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 CD320Q9NPF0 282 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 DNAJC12Q9UKB3 198 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 ZHX1Q9UKY1 873 aaPredicted RBP15.79■□□□□ 0.12
COMMD4-221ENST00000567935 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 Q9Y3F1 56 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 GBF1Q92538 1859 aa15.79■□□□□ 0.12
COMMD4-221ENST00000567935 GOLGA8IPA6NC78 632 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 GOLGA8JA6NMD2 632 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 PRR33A8MZF0 331 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 TOM1L1O75674 476 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 URI1O94763 535 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-221ENST00000567935 C22orf31O95567 290 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 MMP3P08254 477 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 PLEKP08567 350 aaPredicted RBP15.78■□□□□ 0.12
COMMD4-221ENST00000567935 SMPD1P17405 629 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 GCLMP48507 274 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 GPC3P51654 580 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 DLG4P78352 724 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 TNFAIP2Q03169 654 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 PPIGQ13427 754 aaKnown RBP eCLIP15.78■□□□□ 0.124e-7■■■■■ 27.1
COMMD4-221ENST00000567935 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
COMMD4-221ENST00000567935 EFCAB12Q6NXP0 572 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 ZNF365Q70YC5 407 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 ENOSF1Q7L5Y1 443 aa15.78■□□□□ 0.12
COMMD4-221ENST00000567935 ANKRD33Q7Z3H0 272 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms