RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 ADGRG2Q8IZP9 1017 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 UBXN4Q92575 508 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 RPGRQ92834 1020 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 GTF3C6Q969F1 213 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 DCPSQ96C86 337 aaKnown RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 FAM227BQ96M60 508 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 MAP7D2Q96T17 732 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 KCNJ15Q99712 375 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 RTFDC1Q9BY42 306 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-217ENST00000567817 SIL1Q9H173 461 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 RTEL1Q9NZ71 1219 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 TPCN1Q9ULQ1 816 aa6.08□□□□□ -1.44
CAPN3-217ENST00000567817 CEP290O15078 2479 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 WDR19Q8NEZ3 1342 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 VPS37CA5D8V6 355 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 OTOL1A6NHN0 477 aaPredicted RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 H3BQV1 296 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 ARVCFO00192 962 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 FIBPO43427 364 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 RRP9O43818 475 aaKnown RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 EFCAB14O75071 495 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 LRG1P02750 347 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 HSP90B1P14625 803 aaKnown RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 TM4SF4P48230 202 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 TFCP2Q12800 502 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 ADAM9Q13443 819 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 DHX8Q14562 1220 aaKnown RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 ADCK5Q3MIX3 580 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 CCDC158Q5M9N0 1113 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 ZSCAN25Q6NSZ9 544 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 OLFM4Q6UX06 510 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 KIF6Q6ZMV9 814 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 RASAL3Q86YV0 1011 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 FEZF2Q8TBJ5 459 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 RBM17Q96I25 401 aaKnown RBP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 WRNIP1Q96S55 665 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 TMEM209Q96SK2 561 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 SYT3Q9BQG1 590 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 SPATA25Q9BR10 227 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 AGXT2Q9BYV1 514 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 NUP62CLQ9H1M0 184 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 PAG1Q9NWQ8 432 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 NIP7Q9Y221 180 aaKnown RBP eCLIP6.07□□□□□ -1.44
CAPN3-217ENST00000567817 CNPY2Q9Y2B0 182 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 USP16Q9Y5T5 823 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 LAMB4A4D0S4 1761 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 PAPPA2Q9BXP8 1791 aa6.07□□□□□ -1.44
CAPN3-217ENST00000567817 SPEF2Q9C093 1822 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 KIAA0100Q14667 2235 aaKnown RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 A0A0G2JLL6 359 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 NKRFO15226 690 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 RNF113AO15541 343 aaKnown RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 PFKFB2O60825 505 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 COL6A2P12110 1019 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 EPHA5P54756 1037 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 CTSWP56202 376 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 GUCY1A3Q02108 690 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 TUSC3Q13454 348 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 TCIRG1Q13488 830 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 ARHGEF6Q15052 776 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 TTF1Q15361 905 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 CCDC57Q2TAC2 916 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 GLIPR1L2Q4G1C9 344 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 TRIM61Q5EBN2 209 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 EPHA10Q5JZY3 1008 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 PRR31Q5SQ13 230 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 LILRA6Q6PI73 481 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 LMBR1LQ6UX01 489 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 RBM43Q6ZSC3 357 aaKnown RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 SYT8Q8NBV8 401 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 ZNF274Q96GC6 653 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 C20orf173Q96LM9 149 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 ZNF396Q96N95 335 aaPredicted RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 FUCA2Q9BTY2 467 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 ISCA1Q9BUE6 129 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 CNOT7Q9UIV1 285 aaKnown RBP6.06□□□□□ -1.44
CAPN3-217ENST00000567817 DSEQ9UL01 958 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 PTCH2Q9Y6C5 1203 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 ZNF609O15014 1411 aa6.06□□□□□ -1.44
CAPN3-217ENST00000567817 MKI67P46013 3256 aaKnown RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 CYP7B1O75881 506 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 APPP05067 770 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 PCCAP05165 728 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 IFIT1P09914 478 aaKnown RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 EVCP57679 992 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 INHBEP58166 350 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ST3GAL1Q11201 340 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 IMMTQ16891 758 aaKnown RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 FAM26FQ5R3K3 315 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 KCTD1Q719H9 257 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 FRMD5Q7Z6J6 570 aa6.05□□□□□ -1.44
CAPN3-217ENST00000567817 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 ZNF589Q86UQ0 364 aaPredicted RBP6.05□□□□□ -1.44
CAPN3-217ENST00000567817 STK32CQ86UX6 486 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms