RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ZNF808Q8N4W9 903 aaPredicted RBP6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 MDGA1Q8NFP4 955 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 OR52N2Q8NGI0 321 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 RELTQ969Z4 430 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 CLPTM1LQ96KA5 538 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 SENP6Q9GZR1 1112 aaPredicted RBP6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 CALCOCO1Q9P1Z2 691 aa6.24□□□□□ -1.41
SHCBP1-206ENST00000567698 PJA2O43164 708 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 DTNBO60941 627 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 ZNF623O75123 536 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 TUSC2O75896 110 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 IL2RBP14784 551 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 ATF3P18847 181 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 RABGGTBP53611 331 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 NOGQ13253 232 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 SNAPC2Q13487 334 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 RAB39AQ14964 217 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 R3HDM1Q15032 1099 aaKnown RBP6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 BMT2Q1RMZ1 405 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 PPP4R3AQ6IN85 833 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 PDZD4Q76G19 769 aaPredicted RBP6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 ELOA2Q8IYF1 753 aaPredicted RBP6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 RGMAQ96B86 450 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 CGRRF1Q99675 332 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 VRK1Q99986 396 aaPredicted RBP6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 TMEM140Q9NV12 185 aa6.23□□□□□ -1.41
SHCBP1-206ENST00000567698 TBKBP1A7MCY6 615 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 B5MCH6 92 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 ERC2O15083 957 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 B3GALT2O43825 422 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 UBXN7O94888 489 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 SBK3P0C264 359 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 MALP21145 153 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 SLC6A4P31645 630 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 USP14P54578 494 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 NKX6-1P78426 367 aaPredicted RBP6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 ELAVL1Q15717 326 aaKnown RBP6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 GFOD2Q3B7J2 385 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 KHDC1Q4VXA5 237 aaKnown RBP6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 DACT2Q5SW24 774 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 METRNLQ641Q3 311 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 MFSD5Q6N075 450 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 COL23A1Q86Y22 540 aaPredicted RBP6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 SYT12Q8IV01 421 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 DENND1CQ8IV53 801 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 D2HGDHQ8N465 521 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 ARL8AQ96BM9 186 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 MRI1Q9BV20 369 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 FAM30AQ9NZY2 134 aa6.22□□□□□ -1.41
SHCBP1-206ENST00000567698 KLRG2A4D1S0 409 aaPredicted RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 KRTAP9-7A8MTY7 169 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 SLC16A6O15403 523 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 COMTP21964 271 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 AGFG1P52594 562 aaKnown RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 FLYWCH1Q4VC44 716 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 METTL24Q5JXM2 366 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 SWSAP1Q6NVH7 229 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 CHST15Q7LFX5 561 aaPredicted RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 ST8SIA2Q92186 375 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 FAM193BQ96PV7 902 aaPredicted RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 NDC1Q9BTX1 674 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 MOCS1Q9NZB8 636 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 CNOT11Q9UKZ1 510 aaKnown RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 RUVBL1Q9Y265 456 aaKnown RBP6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 NR2E3Q9Y5X4 410 aa6.21□□□□□ -1.42
SHCBP1-206ENST00000567698 PRSS29PA6NIE9 313 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 GRXCR1A8MXD5 290 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 F2RL2O00254 374 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 CTNND1O60716 968 aaKnown RBP6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 FTLP02792 175 aaPredicted RBP6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 ACO1P21399 889 aaKnown RBP6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 GNALP38405 381 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 CTSWP56202 376 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 CDSNQ15517 529 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 NAIF1Q69YI7 327 aaPredicted RBP6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 Q6ZRM9 215 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 RSPH3Q86UC2 560 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 DGKHQ86XP1 1220 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 FAM90A1Q86YD7 464 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 KIAA0319LQ8IZA0 1049 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 TTC9BQ8N6N2 239 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 C3orf20Q8ND61 904 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 EDAQ92838 391 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 TIFAQ96CG3 184 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 TMEM60Q9H2L4 133 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 C1orf112Q9NSG2 853 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 FBXO34Q9NWN3 711 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 ST6GALNAC2Q9UJ37 374 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 PCDHA3Q9Y5H8 950 aa6.2□□□□□ -1.42
SHCBP1-206ENST00000567698 GOLGA6CA6NDK9 693 aa6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 GOLGA6BA6NDN3 693 aa6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 TEX33O43247 280 aa6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 FOXD2O60548 495 aaPredicted RBP6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 SNRPA1P09661 255 aaKnown RBP6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 GOLGA6DP0CG33 693 aa6.19□□□□□ -1.42
SHCBP1-206ENST00000567698 RAP2AP10114 183 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms