RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 RUSC1Q9BVN2 902 aa16.56■□□□□ 0.24
SCAMP2-209ENST00000567638 WDR6Q9NNW5 1121 aaKnown RBP16.56■□□□□ 0.24
SCAMP2-209ENST00000567638 ZDHHC7Q9NXF8 308 aa16.56■□□□□ 0.24
SCAMP2-209ENST00000567638 TNFSF13BQ9Y275 285 aa16.56■□□□□ 0.24
SCAMP2-209ENST00000567638 WDFY4Q6ZS81 3184 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 PIEZO1Q92508 2521 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 GJB2P29033 226 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 MRE11P49959 708 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 TCF15Q12870 199 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 ELAVL2Q12926 359 aaKnown RBP16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 MAPK7Q13164 816 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 DMP1Q13316 513 aaPredicted RBP16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 FAM171A1Q5VUB5 890 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 RINT1Q6NUQ1 792 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 C1orf186Q6ZWK4 172 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 STAMQ92783 540 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 PPP1R10Q96QC0 940 aaKnown RBP16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 NT5C3AQ9H0P0 336 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 TMEM134Q9H6X4 195 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 ARHGAP28Q9P2N2 729 aa16.55■□□□□ 0.24
SCAMP2-209ENST00000567638 TMEM189-UBE2V1I3L0A0 370 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 N4BP1O75113 896 aaKnown RBP16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 GRM5P41594 1212 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 TDGQ13569 410 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 PSMD5Q16401 504 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 ZNF568Q3ZCX4 644 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 GLRA4Q5JXX5 417 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 HYIQ5T013 277 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 CEP57Q86XR8 500 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 LNX1Q8TBB1 728 aaPredicted RBP16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 ACO2Q99798 780 aaKnown RBP16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 CLSTN3Q9BQT9 956 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 TIPINQ9BVW5 301 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 MRPL4Q9BYD3 311 aaKnown RBP16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 CDT1Q9H211 546 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 C17orf75Q9HAS0 396 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 UPF2Q9HAU5 1272 aaKnown RBP16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 KCNK12Q9HB15 430 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 KMT5AQ9NQR1 393 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 FBXW11Q9UKB1 542 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 MYH15Q9Y2K3 1946 aa16.54■□□□□ 0.24
SCAMP2-209ENST00000567638 H3BQV1 296 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 ZMYND10O75800 440 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 GUCY2CP25092 1073 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 GBP2P32456 591 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 ZRSR1Q15695 479 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PDXDC1Q6P996 788 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 KCTD17Q8N5Z5 321 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 CEP120Q8N960 986 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 UROC1Q96N76 676 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PNMA5Q96PV4 448 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 CCDC94Q9BW85 323 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PRKD2Q9BZL6 878 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PIDD1Q9HB75 910 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 PTPRHQ9HD43 1115 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 TOPORSQ9NS56 1045 aaPredicted RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 IGSF9Q9P2J2 1179 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 DUSP12Q9UNI6 340 aa16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 RBM19Q9Y4C8 960 aaKnown RBP16.53■□□□□ 0.24
SCAMP2-209ENST00000567638 VWA3AA6NCI4 1184 aa16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 MCM2P49736 904 aa16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 CLCNKBP51801 687 aa16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 NUBP1P53384 320 aa16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 ARL6IP4Q66PJ3 421 aaKnown RBP16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 TARS2Q9BW92 718 aaKnown RBP16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 EPS15L1Q9UBC2 864 aa16.52■□□□□ 0.24
SCAMP2-209ENST00000567638 NOTCH4Q99466 2003 aa16.52■□□□□ 0.23
SCAMP2-209ENST00000567638 SMIM28A0A1B0GU29 152 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 ABLIM1O14639 778 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 SLC16A4O15374 487 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 B3GAT3O94766 335 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 MCF2P10911 925 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 FGFR3P22607 806 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 PROZP22891 400 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 OSTNP61366 133 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 RAD51AP2Q09MP3 1159 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 UPP1Q16831 310 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 XKR4Q5GH76 650 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 LIN9Q5TKA1 542 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 MPZL3Q6UWV2 235 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 ALKAL1Q6UXT8 129 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 TMEM105Q8N8V8 129 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 SYT2Q8N9I0 419 aaPredicted RBP16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 MYADMQ96S97 322 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 PHOX2BQ99453 314 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 NTPCRQ9BSD7 190 aaKnown RBP16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 MFSD1Q9H3U5 465 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
SCAMP2-209ENST00000567638 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 ADAM12O43184 909 aa16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 HNRNPA1P09651 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 PLS3P13797 630 aa16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 IGFBP6P24592 240 aaPredicted RBP16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 HOXA9P31269 272 aa16.5■□□□□ 0.23
SCAMP2-209ENST00000567638 SLC12A3P55017 1021 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms