RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	HSP90AA2P	Q14568	343 aa	Predicted RBP	10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	KYAT1	Q16773	422 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	SLC10A6	Q3KNW5	377 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	GLRA4	Q5JXX5	417 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	CDKAL1	Q5VV42	579 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FAM117B	Q6P1L5	589 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	ZNF365	Q70YC5	407 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	SLC24A5	Q71RS6	500 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FRMD5	Q7Z6J6	570 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	BRSK2	Q8IWQ3	736 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	TMEM130	Q8N3G9	435 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	PLEKHO2	Q8TD55	490 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	PGBD4	Q96DM1	585 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	VWCE	Q96DN2	955 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	MFSD14A	Q96MC6	490 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	FBXL18	Q96ME1	805 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	RPS6KC1	Q96S38	1066 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	MKNK1	Q9BUB5	465 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	CXCL16	Q9H2A7	254 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	METTL14	Q9HCE5	456 aa	Known RBP	10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	10.18	□□□□□ -0.78	1e-7	■□□□□ 8.5
FANCA-223	ENST00000567284	NR2E3	Q9Y5X4	410 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284	KIAA1671	Q9BY89	1806 aa		10.18	□□□□□ -0.78
FANCA-223	ENST00000567284		A0A0U1RQF3	1178 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	LRRIQ3	A6PVS8	624 aa	Predicted RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	MEFV	O15553	781 aa	Predicted RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	IL18RAP	O95256	599 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	PFKM	P08237	780 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	FGFR1	P11362	822 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	ZNF18	P17022	549 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	ATF7	P17544	494 aa	Predicted RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	EEF1G	P26641	437 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	MLH1	P40692	756 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	GATM	P50440	423 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	COPB1	P53618	953 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	EPHB4	P54760	987 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	TFAM	Q00059	246 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	GSE1	Q14687	1217 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	PSMD6	Q15008	389 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	MAN2A1	Q16706	1144 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	PTPN21	Q16825	1174 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	JADE1	Q6IE81	842 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	AGMO	Q6ZNB7	445 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	INTS8	Q75QN2	995 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	TMCO2	Q7Z6W1	182 aa	Predicted RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	MRPL10	Q7Z7H8	261 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	HELQ	Q8TDG4	1101 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	KIF12	Q96FN5	646 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	SNX27	Q96L92	541 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	ZFP42	Q96MM3	310 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	GAD1	Q99259	594 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	TUBGCP2	Q9BSJ2	902 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	RSAD1	Q9HA92	442 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	GRPEL1	Q9HAV7	217 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	IFNK	Q9P0W0	207 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	LIMA1	Q9UHB6	759 aa	Known RBP	10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	NLRC5	Q86WI3	1866 aa		10.17	□□□□□ -0.78
FANCA-223	ENST00000567284	ABHD14A-ACY1	A0A1B0GW23	586 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	MAPK13	O15264	365 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	ZNF623	O75123	536 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	PHACTR2	O75167	634 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	POMC	P01189	267 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	AMH	P03971	560 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	NFIC	P08651	508 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	KCNJ6	P48051	423 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	GCLM	P48507	274 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	GUCY2F	P51841	1108 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	UBASH3A	P57075	661 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	DEFB103A	P81534	67 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	KCNH2	Q12809	1159 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	BIRC3	Q13489	604 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	TMEM132D	Q14C87	1099 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	SURF1	Q15526	300 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	UVSSA	Q2YD98	709 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	FILIP1L	Q4L180	1135 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	VWA3B	Q502W6	1294 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	PAN2	Q504Q3	1202 aa	Known RBP	10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	TMEM240	Q5SV17	173 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	C16orf59	Q7L2K0	433 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	ZNF598	Q86UK7	904 aa	Known RBP	10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	TRIM59	Q8IWR1	403 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	EFCAB13	Q8IY85	973 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	ABI1	Q8IZP0	508 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	TMC2	Q8TDI7	906 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	PARD3B	Q8TEW8	1205 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	BORCS6	Q96GS4	357 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	CGRRF1	Q99675	332 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.16	□□□□□ -0.78	7e-12	■■□□□ 12.7
FANCA-223	ENST00000567284	TRIM5	Q9C035	493 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	MIOS	Q9NXC5	875 aa		10.16	□□□□□ -0.78
FANCA-223	ENST00000567284	PTPRJ	Q12913	1337 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	TTC26	A0AVF1	554 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	ARL5C	A6NH57	179 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	TBKBP1	A7MCY6	615 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	AP5Z1	O43299	807 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	OFD1	O75665	1012 aa		10.15	□□□□□ -0.78
FANCA-223	ENST00000567284	EOMES	O95936	686 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms