RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 C17orf80Q9BSJ5 609 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 HAPLN2Q9GZV7 340 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 ASB7Q9H672 318 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 CWH43Q9H720 699 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 KLK14Q9P0G3 267 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 KIAA1468Q9P260 1216 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 STK39Q9UEW8 545 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 CPSF3Q9UKF6 684 aaKnown RBP13.25□□□□□ -0.29
SF3B3-208ENST00000567250 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
SF3B3-208ENST00000567250 PSMA7O14818 248 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 FAM189A1O60320 539 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 ARHGEF15O94989 841 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 KCNE1P15382 129 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 HOXD13P35453 343 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 BMPR1AP36894 532 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 XKR4Q5GH76 650 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 KCNT2Q6UVM3 1135 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 LRRC55Q6ZSA7 311 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 DEFB123Q8N688 67 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 SPDYE1Q8NFV5 336 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 NOC3LQ8WTT2 800 aaKnown RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 ERCC4Q92889 916 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 TMEM169Q96HH4 297 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 UROC1Q96N76 676 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 GAS2L1Q99501 681 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 TSG101Q99816 390 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 FAM213AQ9BRX8 229 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 TTYH1Q9H313 450 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 RBAKQ9NYW8 714 aaPredicted RBP13.24□□□□□ -0.29
SF3B3-208ENST00000567250 HSPBP1Q9NZL4 362 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 MAN1B1Q9UKM7 699 aa13.24□□□□□ -0.29
SF3B3-208ENST00000567250 TTC26A0AVF1 554 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 H3BNC9 293 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 PTGESO14684 152 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 TGFB1I1O43294 461 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 RPL13P26373 211 aaKnown RBP13.23□□□□□ -0.29
SF3B3-208ENST00000567250 TNFSF9P41273 254 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 ACOT2P49753 483 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 BCAR1P56945 870 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 UBE3AQ05086 875 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 DSC1Q08554 894 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 MORC3Q14149 939 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 MYBPC2Q14324 1141 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SURF1Q15526 300 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 ENOX2Q16206 610 aaKnown RBP13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SEZ6Q53EL9 994 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 GLRA4Q5JXX5 417 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 NT5DC4Q86YG4 428 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 BRSK2Q8IWQ3 736 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 COLGALT2Q8IYK4 626 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 GSTCDQ8NEC7 633 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 GPT2Q8TD30 523 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 TMEM174Q8WUU8 243 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SAAL1Q96ER3 474 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 PPP1R10Q96QC0 940 aaKnown RBP13.23□□□□□ -0.29
SF3B3-208ENST00000567250 LMAN2LQ9H0V9 348 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 KCTD10Q9H3F6 313 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SEMA6BQ9H3T3 888 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 PCIF1Q9H4Z3 704 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 NRDE2Q9H7Z3 1164 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 CERS4Q9HA82 394 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SPG21Q9NZD8 308 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 UBQLN1Q9UMX0 589 aaKnown RBP13.23□□□□□ -0.29
SF3B3-208ENST00000567250 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 TRAF3IP3Q9Y228 551 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 DERAQ9Y315 318 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
SF3B3-208ENST00000567250 SMIM28A0A1B0GU29 152 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 BICDL2A1A5D9 508 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 ZNF233A6NK53 670 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 CLIC2O15247 247 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 EXOC3O60645 756 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 NR3C1P04150 777 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 ALDH2P05091 517 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 PRCPP42785 496 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 OR1G1P47890 313 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 CYP2J2P51589 502 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 AFF1P51825 1210 aaKnown RBP13.22□□□□□ -0.29
SF3B3-208ENST00000567250 KRT17Q04695 432 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 LRRC63Q05C16 580 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 GPM6BQ13491 265 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 SNRNP35Q16560 246 aaKnown RBP13.22□□□□□ -0.29
SF3B3-208ENST00000567250 NFIL3Q16649 462 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 PTPROQ16827 1216 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 EDRF1Q3B7T1 1238 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 SLC10A6Q3KNW5 377 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 ZBTB41Q5SVQ8 909 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 ALKAL1Q6UXT8 129 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 USP37Q86T82 979 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 ZNF280BQ86YH2 543 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 SLC9A9Q8IVB4 645 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 SMYD4Q8IYR2 804 aaPredicted RBP13.22□□□□□ -0.29
SF3B3-208ENST00000567250 SLC39A11Q8N1S5 342 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 FAM212AQ96EL1 285 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 KIF12Q96FN5 646 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
SF3B3-208ENST00000567250 HCSTQ9UBK5 93 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms