RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 HBP1O60381 514 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 RHOXF2BP0C7M4 288 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 DLATP10515 647 aaKnown RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 CHRM1P11229 460 aaPredicted RBP25.05■■□□□ 1.6
LINC00543-201ENST00000567234 CCDC91Q7Z6B0 441 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 PPM1KQ8N3J5 372 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 MMGT1Q8N4V1 131 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 TPCN2Q8NHX9 752 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 TAS1R2Q8TE23 839 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 RHOXF2Q9BQY4 288 aa25.05■■□□□ 1.6
LINC00543-201ENST00000567234 RBM47A0AV96 593 aaKnown RBP25.04■■□□□ 1.6
LINC00543-201ENST00000567234 NCK2O43639 380 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 GRM1Q13255 1194 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 PRPF4BQ13523 1007 aaKnown RBP25.04■■□□□ 1.6
LINC00543-201ENST00000567234 LAMC2Q13753 1193 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 CCDC181Q5TID7 509 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 SLFN11Q7Z7L1 901 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 SYCE1Q8N0S2 351 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 FNBP1Q96RU3 617 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 ZIC5Q96T25 663 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 TARS2Q9BW92 718 aaKnown RBP25.04■■□□□ 1.6
LINC00543-201ENST00000567234 TOPORSQ9NS56 1045 aaPredicted RBP25.04■■□□□ 1.6
LINC00543-201ENST00000567234 ADGRA2Q96PE1 1338 aa25.04■■□□□ 1.6
LINC00543-201ENST00000567234 ANKRD62A6NC57 917 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 ADORA2AP29274 412 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 GCNT1Q02742 428 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 CRELD2Q6UXH1 353 aaPredicted RBP25.03■■□□□ 1.6
LINC00543-201ENST00000567234 CTNNBL1Q8WYA6 563 aaPredicted RBP25.03■■□□□ 1.6
LINC00543-201ENST00000567234 RFFLQ8WZ73 363 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 CCDC102AQ96A19 550 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 CCDC113Q9H0I3 377 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 C2orf40Q9H1Z8 148 aa25.03■■□□□ 1.6
LINC00543-201ENST00000567234 FTCDO95954 541 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 MARK3P27448 753 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 NLRP11P59045 1033 aaKnown RBP25.02■■□□□ 1.6
LINC00543-201ENST00000567234 VSNL1P62760 191 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 ZACNQ401N2 412 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 CFAP221Q4G0U5 840 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 CCDC70Q6NSX1 233 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 TRIM50Q86XT4 487 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 MSTO1Q9BUK6 570 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 HAPLN2Q9GZV7 340 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 PDGFCQ9NRA1 345 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 IVNS1ABPQ9Y6Y0 642 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 ARHGAP1Q07960 439 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 LAMTOR4Q0VGL1 99 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 DRP2Q13474 957 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 TAPT1Q6NXT6 567 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 ZBTB8OSQ8IWT0 167 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 SPATA4Q8NEY3 305 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 ZNF516Q92618 1163 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 COPS5Q92905 334 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 KAT5Q92993 513 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 MRPL4Q9BYD3 311 aaKnown RBP25.02■■□□□ 1.6
LINC00543-201ENST00000567234 ISCUQ9H1K1 167 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 FAM204AQ9H8W3 233 aa25.02■■□□□ 1.6
LINC00543-201ENST00000567234 MSCO60682 206 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 GZMAP12544 262 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 MKRN4PQ13434 485 aaPredicted RBP25.01■■□□□ 1.59
LINC00543-201ENST00000567234 TCEAL1Q15170 157 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 RPS6KA1Q15418 735 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 EPS8L1Q8TE68 723 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 EMID1Q96A84 441 aaPredicted RBP25.01■■□□□ 1.59
LINC00543-201ENST00000567234 RBAKQ9NYW8 714 aaPredicted RBP25.01■■□□□ 1.59
LINC00543-201ENST00000567234 ERAP1Q9NZ08 941 aa25.01■■□□□ 1.59
LINC00543-201ENST00000567234 NOCTQ9UK39 431 aaKnown RBP25.01■■□□□ 1.59
LINC00543-201ENST00000567234 MANSC4A6NHS7 340 aaPredicted RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 ASAP2O43150 1006 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 C4BPAP04003 597 aaKnown RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 CXCR5P32302 372 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 ACOT2P49753 483 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 HADHBP55084 474 aaKnown RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 MAMDC4Q6UXC1 1216 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 ZBTB45Q96K62 511 aaPredicted RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 TOM1L1O75674 476 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 KIF4AO95239 1232 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 GH1P01241 217 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 TNNI1P19237 187 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 TFDP1Q14186 410 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 CYP4F22Q6NT55 531 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 PAXIP1Q6ZW49 1069 aaPredicted RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 SPATS2Q86XZ4 545 aaKnown RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 RPUSD2Q8IZ73 545 aaKnown RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 SLC20A1Q8WUM9 679 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 TAF4BQ92750 862 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 PBKQ96KB5 322 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 PARK7Q99497 189 aaKnown RBP25■■□□□ 1.59
LINC00543-201ENST00000567234 SUGCTQ9HAC7 445 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 C1orf112Q9NSG2 853 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 TRPC6Q9Y210 931 aa25■■□□□ 1.59
LINC00543-201ENST00000567234 CLDN3O15551 220 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 RNF40O75150 1001 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 RTN2O75298 545 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 MATR3P43243 847 aaKnown RBP eCLIP24.99■■□□□ 1.59
LINC00543-201ENST00000567234 MAPK6Q16659 721 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 ZNF484Q5JVG2 852 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 RHOT2Q8IXI1 618 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 CGRRF1Q99675 332 aa24.99■■□□□ 1.59
LINC00543-201ENST00000567234 SEPT11Q9NVA2 429 aaKnown RBP24.99■■□□□ 1.59
LINC00543-201ENST00000567234 ANKFY1Q9P2R3 1169 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms