RNA–Protein interactions for RNA: ENST00000567232.1

TNRC6A-212, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-212ENST00000567232 ECHDC2Q86YB7 292 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 SYT12Q8IV01 421 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 MARVELD3Q96A59 401 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 TTC14Q96N46 770 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 MRPL9Q9BYD2 267 aaKnown RBP9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 PRDM16Q9HAZ2 1276 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 TRPV5Q9NQA5 729 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 HIVEP3Q5T1R4 2406 aa9.38□□□□□ -0.91
TNRC6A-212ENST00000567232 MED13LQ71F56 2210 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 ZMYM6O95789 1325 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 GPR182O15218 404 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 DKK1O94907 266 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 PCP11498 1178 aaKnown RBP9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 PTGER3P43115 390 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 NT5C2P49902 561 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 DGKEP52429 567 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 SP4Q02446 784 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 CTDSPL2Q05D32 466 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 CCDC157Q569K6 752 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 LILRA6Q6PI73 481 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 CYFIP1Q7L576 1253 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 SMC5Q8IY18 1101 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 SYNPOQ8N3V7 929 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 DCAF4Q8WV16 495 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 TMEM176AQ96HP8 235 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 LPIN3Q9BQK8 851 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 STARD5Q9NSY2 213 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 DNAAF2Q9NVR5 837 aaKnown RBP9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 PCOLCE2Q9UKZ9 415 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 SLC6A14Q9UN76 642 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
TNRC6A-212ENST00000567232 KDM3AQ9Y4C1 1321 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 SPECC1L-ADORA2AF8WAN1 911 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 ZNF263O14978 683 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 HSPD1P10809 573 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 HOXB4P17483 251 aaPredicted RBP9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 SLC14A1Q13336 389 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 SMAD1Q15797 465 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 USH1GQ495M9 461 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 FAM78AQ5JUQ0 283 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 VPS53Q5VIR6 699 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 KCNV1Q6PIU1 500 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 VITQ6UXI7 678 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 FAM228AQ86W67 206 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 CSGALNACT1Q8TDX6 532 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 SETD7Q8WTS6 366 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 LGMNQ99538 433 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 TPSD1Q9BZJ3 242 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 MAF1Q9H063 256 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 RXFP1Q9HBX9 757 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 ZFP14Q9HCL3 533 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 PNMA2Q9UL42 364 aa9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 MRPS23Q9Y3D9 190 aaKnown RBP9.36□□□□□ -0.91
TNRC6A-212ENST00000567232 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 ARNTLO00327 626 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 RANBP6O60518 1105 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 NMT2O60551 498 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 GJB3O75712 270 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 SOD2P04179 222 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 TOP1P11387 765 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 PSMC3P17980 439 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 DCTP40126 519 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 CLDN6P56747 220 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 CCDC96Q2M329 555 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 LONRF3Q496Y0 759 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 PABPC1LQ4VXU2 614 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 BROXQ5VW32 411 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 DAGLBQ8NCG7 672 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 RGS22Q8NE09 1264 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 FAM200AQ8TCP9 573 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 TRAPPC12Q8WVT3 735 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 FAM227BQ96M60 508 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 PPP1R16BQ96T49 567 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 NOTCH4Q99466 2003 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 TMEM47Q9BQJ4 181 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 RWDD1Q9H446 243 aaPredicted RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 PXMP2Q9NR77 195 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 GDE1Q9NZC3 331 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 ATRQ13535 2644 aa9.35□□□□□ -0.91
TNRC6A-212ENST00000567232 A0A0D9SFI3 127 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 A1L4Q6 167 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 MYBPHLA2RUH7 354 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 TNFRSF10BO14763 440 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 ZNF862O60290 1169 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 ATG13O75143 517 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 RPLP2P05387 115 aaKnown RBP9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 SNHG28P0DPA3 235 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 HOXB1P14653 301 aaPredicted RBP9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 CEBPBP17676 345 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 ITPKAP23677 461 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 CTHP32929 405 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 VIPR2P41587 438 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 MFAP1P55081 439 aaKnown RBP9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 MLLT6P55198 1093 aaPredicted RBP9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 MYO1EQ12965 1108 aa9.34□□□□□ -0.91
TNRC6A-212ENST00000567232 SLC5A9Q2M3M2 681 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms