RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
RAB40C-210ENST00000566290 CLTBP09497 229 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 STAT1P42224 750 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 CDK7P50613 346 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 KLHL30Q0D2K2 578 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 RAPGEF1Q13905 1077 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 HSDL1Q3SXM5 330 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 CBWD6Q4V339 395 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 CBWD3Q5JTY5 395 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 CBWD5Q5RIA9 395 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 MTERF4Q7Z6M4 381 aaKnown RBP18.18■□□□□ 0.5
RAB40C-210ENST00000566290 TRIM58Q8NG06 486 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 ASAP3Q8TDY4 903 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 PPP1R13LQ8WUF5 828 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 GLT1D1Q96MS3 346 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 SPATA33Q96N06 139 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 NAPGQ99747 312 aaPredicted RBP18.18■□□□□ 0.5
RAB40C-210ENST00000566290 SH2D3AQ9BRG2 576 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 EPHX3Q9H6B9 360 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 TMEM8AQ9HCN3 771 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 ERAP1Q9NZ08 941 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 PCDHA13Q9Y5I0 950 aa18.18■□□□□ 0.5
RAB40C-210ENST00000566290 ZBTB42B2RXF5 422 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 ANKRD63C9JTQ0 380 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 F8VZ95 297 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 KIAA0355O15063 1070 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 ASAP2O43150 1006 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 EXTL3O43909 919 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 ADRB2P07550 413 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 BMP1P13497 986 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 RAG1P15918 1043 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 MXI1P50539 228 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 POU5F1Q01860 360 aaKnown RBP18.17■□□□□ 0.5
RAB40C-210ENST00000566290 FPGSQ05932 587 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 CYP24A1Q07973 514 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 FAAP100Q0VG06 881 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 BMS1Q14692 1282 aaKnown RBP18.17■□□□□ 0.5
RAB40C-210ENST00000566290 PLCB4Q15147 1175 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 TDRD12Q587J7 1177 aaKnown RBP18.17■□□□□ 0.5
RAB40C-210ENST00000566290 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 IQCEQ6IPM2 695 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 VPS36Q86VN1 386 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 IFNLR1Q8IU57 520 aaPredicted RBP18.17■□□□□ 0.5
RAB40C-210ENST00000566290 DEPTORQ8TB45 409 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 ANKRD7Q92527 254 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 PBX4Q9BYU1 374 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 CCDC113Q9H0I3 377 aa18.17■□□□□ 0.5
RAB40C-210ENST00000566290 EFCAB8A8MWE9 144 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 ARVCFO00192 962 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 SORBS3O60504 671 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 PLEKP08567 350 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-210ENST00000566290 MYL3P08590 195 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 SOX5P35711 763 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 GPC3P51654 580 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 AMPD2Q01433 879 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 CAPSQ13938 189 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 PSMD6Q15008 389 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 WHAMMP3Q1A5X7 153 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 ZNF569Q5MCW4 686 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 PAPD7Q5XG87 772 aaKnown RBP18.16■□□□□ 0.5
RAB40C-210ENST00000566290 KRT39Q6A163 491 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 C15orf39Q6ZRI6 1047 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 ANKRD33Q7Z3H0 272 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 SLC35F6Q8N357 371 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 UBE2Q2Q8WVN8 375 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 PSPC1Q8WXF1 523 aaKnown RBP18.16■□□□□ 0.5
RAB40C-210ENST00000566290 GLG1Q92896 1179 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 SECISBP2LQ93073 1101 aaKnown RBP18.16■□□□□ 0.5
RAB40C-210ENST00000566290 SYT11Q9BT88 431 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 CDC23Q9UJX2 597 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 ZNF215Q9UL58 517 aaPredicted RBP18.16■□□□□ 0.5
RAB40C-210ENST00000566290 HCN4Q9Y3Q4 1203 aa18.16■□□□□ 0.5
RAB40C-210ENST00000566290 CHD9Q3L8U1 2897 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 A0A0U1RQG5 324 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-210ENST00000566290 A6NJR5 290 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 MAGEB2O15479 319 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 URI1O94763 535 aaPredicted RBP18.15■□□□□ 0.5
RAB40C-210ENST00000566290 TRIM49P0CI25 452 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 TRIM49CP0CI26 452 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 ACTN1P12814 892 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 PRLRP16471 622 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 IGFBP4P22692 258 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 MAGEA1P43355 309 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 LIG4P49917 911 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 PURAQ00577 322 aaKnown RBP18.15■□□□□ 0.5
RAB40C-210ENST00000566290 PPP3CAQ08209 521 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 TFDP1Q14186 410 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 ENOSF1Q7L5Y1 443 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 CBWD2Q8IUF1 395 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 LINC01465Q8N7H1 131 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 SLC43A3Q8NBI5 491 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 PLEKHO2Q8TD55 490 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 AFG1LQ8WV93 481 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 POMGNT1Q8WZA1 660 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 CALR3Q96L12 384 aaKnown RBP18.15■□□□□ 0.5
RAB40C-210ENST00000566290 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.15■□□□□ 0.5
RAB40C-210ENST00000566290 KIFC3Q9BVG8 833 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 LACRTQ9GZZ8 138 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 MUC6Q6W4X9 2439 aa18.15■□□□□ 0.5
RAB40C-210ENST00000566290 A0A0A6YYK5 440 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms