RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 BHMT2Q9H2M3 363 aa20.75■□□□□ 0.91
ABCA3-204ENST00000566200 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.75■□□□□ 0.91
ABCA3-204ENST00000566200 GDAQ9Y2T3 454 aa20.75■□□□□ 0.91
ABCA3-204ENST00000566200 SRFP11831 508 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 CCT6AP40227 531 aaKnown RBP20.74■□□□□ 0.91
ABCA3-204ENST00000566200 HTR4Q13639 388 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 TMEM132AQ24JP5 1023 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 FRMD5Q7Z6J6 570 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 KIF2CQ99661 725 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 ADPGKQ9BRR6 497 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 CA14Q9ULX7 337 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 MYH15Q9Y2K3 1946 aa20.74■□□□□ 0.91
ABCA3-204ENST00000566200 NOTCH4Q99466 2003 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 TOB1P50616 345 aaPredicted RBP20.73■□□□□ 0.91
ABCA3-204ENST00000566200 NTHL1P78549 312 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 PPP2R5AQ15172 486 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 GLRA4Q5JXX5 417 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 HAUS3Q68CZ6 603 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 GRASPQ7Z6J2 395 aaPredicted RBP20.73■□□□□ 0.91
ABCA3-204ENST00000566200 DTWD2Q8NBA8 298 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 GPR152Q8TDT2 470 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 NXPE3Q969Y0 559 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 PPP1R10Q96QC0 940 aaKnown RBP20.73■□□□□ 0.91
ABCA3-204ENST00000566200 RTP3Q9BQQ7 232 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 RPP25Q9BUL9 199 aaKnown RBP20.73■□□□□ 0.91
ABCA3-204ENST00000566200 KIAA1024Q9UPX6 916 aa20.73■□□□□ 0.91
ABCA3-204ENST00000566200 TMEM189-UBE2V1I3L0A0 370 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 FGFR3P22607 806 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 TRAPPC10P48553 1259 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 RBM25P49756 843 aaKnown RBP20.72■□□□□ 0.91
ABCA3-204ENST00000566200 DCAF4L1Q3SXM0 396 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 ATF7IP2Q5U623 682 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 RSPO2Q6UXX9 243 aaPredicted RBP20.72■□□□□ 0.91
ABCA3-204ENST00000566200 DAW1Q8N136 415 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 CEP120Q8N960 986 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 LRWD1Q9UFC0 647 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 NUMBLQ9Y6R0 609 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 COL4A3Q01955 1670 aa20.72■□□□□ 0.91
ABCA3-204ENST00000566200 C8AP07357 584 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 HNRNPA1P09651 372 aaKnown RBP eCLIP20.71■□□□□ 0.91
ABCA3-204ENST00000566200 FSHRP23945 695 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 CLCNKBP51801 687 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 EFNA5P52803 228 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 HMGN5P82970 282 aaKnown RBP20.71■□□□□ 0.91
ABCA3-204ENST00000566200 ELAVL2Q12926 359 aaKnown RBP20.71■□□□□ 0.91
ABCA3-204ENST00000566200 ANGPT1Q15389 498 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 IL17AQ16552 155 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.71■□□□□ 0.91
ABCA3-204ENST00000566200 C3orf58Q8NDZ4 430 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 KIFAP3Q92845 792 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 FGF14Q92915 247 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 IFT74Q96LB3 600 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 GOLGA2P5Q9HBQ8 144 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 DDX19AQ9NUU7 478 aaKnown RBP20.71■□□□□ 0.91
ABCA3-204ENST00000566200 PCDHB6Q9Y5E3 794 aa20.71■□□□□ 0.91
ABCA3-204ENST00000566200 PP2D1A8MPX8 630 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 CCL16O15467 120 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
ABCA3-204ENST00000566200 U2AF2P26368 475 aaKnown RBP eCLIP20.7■□□□□ 0.9
ABCA3-204ENST00000566200 HOXA9P31269 272 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 RAB33AQ14088 237 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 UPP1Q16831 310 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 PPM1LQ5SGD2 360 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 LIN9Q5TKA1 542 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 ERICH6BQ5W0A0 696 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 PARM1Q6UWI2 310 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 TAS1R3Q7RTX0 852 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 CDT1Q9H211 546 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 TBC1D17Q9HA65 648 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 PTPRHQ9HD43 1115 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 SLC2A4RGQ9NR83 387 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 MTRRQ9UBK8 725 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 TNFSF13BQ9Y275 285 aa20.7■□□□□ 0.9
ABCA3-204ENST00000566200 E9PMD0 336 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 I3L4J1 428 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 K7ERI5 159 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 B3GAT3O94766 335 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 OR1D2P34982 312 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 NPTX2P47972 431 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 SOX4Q06945 474 aaPredicted RBP20.69■□□□□ 0.9
ABCA3-204ENST00000566200 MAPK7Q13164 816 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 PTGDRQ13258 359 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 PDIA5Q14554 519 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 XKR4Q5GH76 650 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 AXDND1Q5T1B0 1012 aaPredicted RBP20.69■□□□□ 0.9
ABCA3-204ENST00000566200 PDXDC1Q6P996 788 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 ITFG1Q8TB96 612 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 SLC7A14Q8TBB6 771 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 SNX29Q8TEQ0 813 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 HCFC1R1Q9NWW0 138 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 DLGAP2Q9P1A6 1054 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 CDH7Q9ULB5 785 aa20.69■□□□□ 0.9
ABCA3-204ENST00000566200 NOL7Q9UMY1 257 aaKnown RBP20.69■□□□□ 0.9
ABCA3-204ENST00000566200 ZFP37Q9Y6Q3 630 aaPredicted RBP20.69■□□□□ 0.9
ABCA3-204ENST00000566200 SMIM28A0A1B0GU29 152 aa20.68■□□□□ 0.9
ABCA3-204ENST00000566200 STK25O00506 426 aa20.68■□□□□ 0.9
ABCA3-204ENST00000566200 TKTP29401 623 aaKnown RBP20.68■□□□□ 0.9
ABCA3-204ENST00000566200 CDC25AP30304 524 aa20.68■□□□□ 0.9
ABCA3-204ENST00000566200 GRM5P41594 1212 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms