RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 ZNF568Q3ZCX4 644 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 CCDC112Q8NEF3 446 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 NEK11Q8NG66 645 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 CACTINQ8WUQ7 758 aaKnown RBP20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 OSMRQ99650 979 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 PRDM12Q9H4Q4 367 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 PLCB1Q9NQ66 1216 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 MSRAQ9UJ68 235 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 CAPN11Q9UMQ6 739 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 DAAM1Q9Y4D1 1078 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 TRPV2Q9Y5S1 764 aa20.7■□□□□ 0.9
CSPG4P13-201ENST00000565545 CAND2O75155 1236 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 CASP14P31944 242 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 CLDN10P78369 228 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 EXOC3L4Q17RC7 722 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 CRELD2Q6UXH1 353 aaPredicted RBP20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 CATSPER4Q7RTX7 472 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 ZBTB33Q86T24 672 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 ZNF397Q8NF99 534 aaPredicted RBP20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 PANX2Q96RD6 677 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 ADPGKQ9BRR6 497 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 TTYH3Q9C0H2 523 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 MTIF3Q9H2K0 278 aaKnown RBP20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 PDZD7Q9H5P4 517 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 MMRN2Q9H8L6 949 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 IL23AQ9NPF7 189 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 GINS2Q9Y248 185 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 LUC7L2Q9Y383 392 aaKnown RBP20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 TTC28Q96AY4 2481 aa20.69■□□□□ 0.9
CSPG4P13-201ENST00000565545 FAM189A1O60320 539 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 MFAP3LO75121 409 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 FGBP02675 491 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 TRIM49P0CI25 452 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 TRIM49CP0CI26 452 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 ACOT2P49753 483 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 AP3M2P53677 418 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 MYL7Q01449 175 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 RAB30Q15771 203 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 DCAF4L1Q3SXM0 396 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 C1orf220Q5T0J3 134 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 RASIP1Q5U651 963 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 BRSK2Q8IWQ3 736 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 CCDC155Q8N6L0 562 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 TC2NQ8N9U0 490 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 CDT1Q9H211 546 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 CDHR5Q9HBB8 845 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 TMEM8AQ9HCN3 771 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 RBAKQ9NYW8 714 aaPredicted RBP20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 CPSF3Q9UKF6 684 aaKnown RBP20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 NOD1Q9Y239 953 aa20.68■□□□□ 0.9
CSPG4P13-201ENST00000565545 CSDE1O75534 798 aaKnown RBP20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 IGFBP4P22692 258 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 DLG4P78352 724 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 ZBED6P86452 979 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 EEF1DP3Q658K8 133 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 KRT39Q6A163 491 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 NOTUMQ6P988 496 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 PLEKHO2Q8TD55 490 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 CPLX3Q8WVH0 158 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 CCDC127Q96BQ5 260 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 LSM14BQ9BX40 385 aaKnown RBP20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 HIPK3Q9H422 1215 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 FBXL5Q9UKA1 691 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 CDY2AQ9Y6F7 541 aa20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.67■□□□□ 0.9
CSPG4P13-201ENST00000565545 TTC26A0AVF1 554 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 LRRIQ3A6PVS8 624 aaPredicted RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 TNFRSF10AO00220 468 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CD4P01730 458 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CLTAP09496 248 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 HARSP12081 509 aaKnown RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 PON1P27169 355 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 KLK7P49862 253 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 MXI1P50539 228 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 ADKP55263 362 aaKnown RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 PPP3CAQ08209 521 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 ARID5BQ14865 1188 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CCDC85BQ15834 202 aaPredicted RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 TSR1Q2NL82 804 aaKnown RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 OR8K1Q8NGG5 319 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 HERVK_113Q902F9 699 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CPB2Q96IY4 423 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CRACR2AQ9BSW2 395 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 NAA15Q9BXJ9 866 aaKnown RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 NUCKS1Q9H1E3 243 aaKnown RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 KCNF1Q9H3M0 494 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 FAM207AQ9NSI2 230 aaPredicted RBP20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 AGPAT5Q9NUQ2 364 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 GCNT4Q9P109 453 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 CEP72Q9P209 647 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 ZKSCAN5Q9Y2L8 839 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 COQ4Q9Y3A0 265 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 EYSQ5T1H1 3165 aa20.66■□□□□ 0.9
CSPG4P13-201ENST00000565545 PRUNE2Q8WUY3 3088 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 IL18RAPO95256 599 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 HOXA11P31270 313 aaPredicted RBP20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 KRT9P35527 623 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 CCL23P55773 120 aa20.65■□□□□ 0.9
CSPG4P13-201ENST00000565545 MGAT3Q09327 533 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms