RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 ASGR2P07307 311 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 SPATA31D3P0C874 917 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 RPL17P18621 184 aaKnown RBP17.2■□□□□ 0.34
CDH3-204ENST00000565453 CREMQ03060 361 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 GLRA4Q5JXX5 417 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 FAM171A1Q5VUB5 890 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 ALKAL1Q6UXT8 129 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 CYP26C1Q6V0L0 522 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 SPATA31D4Q6ZUB0 917 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 CCDC149Q6ZUS6 474 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 APBB1IPQ7Z5R6 666 aaPredicted RBP17.2■□□□□ 0.34
CDH3-204ENST00000565453 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 PLCD3Q8N3E9 789 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 FBXL6Q8N531 539 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
CDH3-204ENST00000565453 LRRC15Q8TF66 581 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 PIK3R5Q8WYR1 880 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 ZNF707Q96C28 371 aaPredicted RBP17.2■□□□□ 0.34
CDH3-204ENST00000565453 AK8Q96MA6 479 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 TTPALQ9BTX7 342 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 PLEKHA4Q9H4M7 779 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 LIMD1Q9UGP4 676 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 DPP7Q9UHL4 492 aa17.2■□□□□ 0.34
CDH3-204ENST00000565453 SLC26A4O43511 780 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 MYBP10242 640 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 PLS3P13797 630 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
CDH3-204ENST00000565453 GRIN1Q05586 938 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 RAD51AP2Q09MP3 1159 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 MTMR3Q13615 1198 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 ZNF568Q3ZCX4 644 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 ARSHQ5FYA8 562 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 BRAPQ7Z569 592 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 GLYCTKQ8IVS8 523 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 UBALD2Q8IYN6 164 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 TMEM161BQ8NDZ6 487 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 CLSTN3Q9BQT9 956 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 SMOC2Q9H3U7 446 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 WDR6Q9NNW5 1121 aaKnown RBP17.19■□□□□ 0.34
CDH3-204ENST00000565453 KCND2Q9NZV8 630 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
CDH3-204ENST00000565453 MTCL1Q9Y4B5 1905 aaKnown RBP17.19■□□□□ 0.34
CDH3-204ENST00000565453 KMT2EQ8IZD2 1858 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 NPHP3-ACAD11A0A0J9YXS1 232 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 SMIM28A0A1B0GU29 152 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 MEFVO15553 781 aaPredicted RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 MAPTP10636 758 aaKnown RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 MCF2P10911 925 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 CLCNKBP51801 687 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 SOX4Q06945 474 aaPredicted RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 ELAVL2Q12926 359 aaKnown RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 UPP1Q16831 310 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 ELMSAN1Q6PJG2 1045 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 MPZL3Q6UWV2 235 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 OTOP3Q7RTS5 596 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 KCNN1Q92952 543 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 ACSF2Q96CM8 615 aaPredicted RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 ZBTB45Q96K62 511 aaPredicted RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 SNX27Q96L92 541 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 UROC1Q96N76 676 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 CCDC94Q9BW85 323 aaPredicted RBP17.18■□□□□ 0.34
CDH3-204ENST00000565453 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 ZDHHC7Q9NXF8 308 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 FBXW11Q9UKB1 542 aa17.18■□□□□ 0.34
CDH3-204ENST00000565453 TRIP11Q15643 1979 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 ADAM12O43184 909 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 BMP15O95972 392 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 PDGFBP01127 241 aaPredicted RBP17.17■□□□□ 0.34
CDH3-204ENST00000565453 FGFR3P22607 806 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 OSTNP61366 133 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 CACNB1Q02641 598 aaPredicted RBP17.17■□□□□ 0.34
CDH3-204ENST00000565453 PSMD5Q16401 504 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.17■□□□□ 0.34
CDH3-204ENST00000565453 CEP57Q86XR8 500 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 SMG7Q92540 1137 aaKnown RBP17.17■□□□□ 0.34
CDH3-204ENST00000565453 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 ZMAT2Q96NC0 199 aaKnown RBP17.17■□□□□ 0.34
CDH3-204ENST00000565453 BLOC1S4Q9NUP1 217 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 KCNG1Q9UIX4 513 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 MYO10Q9HD67 2058 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 CLUHO75153 1309 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 MUC6Q6W4X9 2439 aa17.17■□□□□ 0.34
CDH3-204ENST00000565453 TOM1L1O75674 476 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 ZMYND10O75800 440 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 B3GAT3O94766 335 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 KCNE1P15382 129 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 YARSP54577 528 aaKnown RBP17.16■□□□□ 0.34
CDH3-204ENST00000565453 VCPP55072 806 aaKnown RBP17.16■□□□□ 0.34
CDH3-204ENST00000565453 NCKAP1LP55160 1127 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 NHLH1Q02575 133 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 SF3A1Q15459 793 aaKnown RBP17.16■□□□□ 0.34
CDH3-204ENST00000565453 IER5LQ5T953 404 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 SUGP1Q8IWZ8 645 aaKnown RBP17.16■□□□□ 0.34
CDH3-204ENST00000565453 PRSS33Q8NF86 280 aa17.16■□□□□ 0.34
CDH3-204ENST00000565453 ACAP3Q96P50 834 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms