RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 A0A0B4J203 849 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 WDR91A4D1P6 747 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 BTBD18B2RXH4 712 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 RNF103O00237 685 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FOXN3O00409 490 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CASQ2O14958 399 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 TLR3O15455 904 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FOXD2O60548 495 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 DKC1O60832 514 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PSMG1O95456 288 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 OLFM2O95897 454 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 MYCP01106 439 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FGAP02671 866 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CYP1A1P04798 512 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GYPCP04921 128 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 HMGN1P05114 100 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 C8BP07358 591 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ESRRAP11474 423 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 RARGP13631 454 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 UQCRBP14927 111 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CHN1P15882 459 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PFKFB1P16118 471 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 BTF3P20290 206 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CES1P23141 567 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 HOXA7P31268 230 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 TUFMP49411 452 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CDK9P50750 372 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 MAP3K7CLP57077 242 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 STX1BP61266 288 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 UBXN2AP68543 259 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CYP4F2P78329 520 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CYP4F3Q08477 520 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 MORC3Q14149 939 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 KCTD2Q14681 263 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PSMD6Q15008 389 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 SLC39A14Q15043 492 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CNGA2Q16280 664 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 SHROOM1Q2M3G4 852 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 WDR72Q3MJ13 1102 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PLA2G4EQ3MJ16 856 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 C6orf183Q5T699 404 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FIP1L1Q6UN15 594 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 KIF6Q6ZMV9 814 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 RGS9BPQ6ZS82 235 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FASTKD5Q7L8L6 764 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 HDDC2Q7Z4H3 204 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 LIMS2Q7Z4I7 341 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GPR141Q7Z602 305 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GSPT2Q8IYD1 628 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PM20D2Q8IYS1 436 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CYP4X1Q8N118 509 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 KIAA1958Q8N8K9 716 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 SEC14L1Q92503 715 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 MAP4K1Q92918 833 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GLMNQ92990 594 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ERP27Q96DN0 273 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ASIC4Q96FT7 647 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 RUNDC3BQ96NL0 473 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FNBP1Q96RU3 617 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 FERMT1Q9BQL6 677 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 TSEN34Q9BSV6 310 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 KLC2Q9H0B6 622 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CCSER2Q9H7U1 834 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 QTRT2Q9H974 415 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GPBP1L1Q9HC44 474 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 EPB41L5Q9HCM4 733 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 NDE1Q9NXR1 346 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 DDX56Q9NY93 547 aaKnown RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 GMIPQ9P107 970 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ZRANB1Q9UGI0 708 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PARP2Q9UGN5 583 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 CDH7Q9ULB5 785 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 NFU1Q9UMS0 254 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 STARD13Q9Y3M8 1113 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ACTL7BQ9Y614 415 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 SPHKAPQ2M3C7 1700 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
PTPN9-204ENST00000564970 PXDNLA1KZ92 1463 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 SYCP2Q9BX26 1530 aa6.66□□□□□ -1.34
PTPN9-204ENST00000564970 ABCA8O94911 1581 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 VWDEQ8N2E2 1590 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 A0A1W2PQJ5 194 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 TRIM64A6NGJ6 449 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 TRIM64BA6NI03 449 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NUTM2BA6NNL0 878 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NUTM2EB1AL46 878 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 CAPN9O14815 690 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 RASGRF2O14827 1237 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 VILLO15195 856 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 ACOX3O15254 700 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 NCAM2O15394 837 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 RGS16O15492 202 aaPredicted RBP6.65□□□□□ -1.34
PTPN9-204ENST00000564970 PJA2O43164 708 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 SCO2O43819 266 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 EXTL3O43909 919 aa6.65□□□□□ -1.34
PTPN9-204ENST00000564970 MAGEC1O60732 1142 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms