RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SYT15Q9BQS2 421 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GGA1Q9UJY5 639 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 K7ENM7 598 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BMP3P12645 472 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ANXA13P27216 316 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GBP1P32455 592 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GRAPQ13588 217 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 NBPF20Q3BBV1 942 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RFWD3Q6PCD5 774 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ARHGEF18Q6ZSZ5 1173 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GRAPLQ8TC17 118 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 UCMAQ8WVF2 138 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 KLF6Q99612 283 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GOLGA8RI6L899 631 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PEX11AO75192 247 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ZSCAN5DPP0CG00 497 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ALAS1P13196 640 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MTFR1Q15390 333 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TMEM63BQ5T3F8 832 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RNF220Q5VTB9 566 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ROPN1BQ9BZX4 212 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ROPN1Q9HAT0 212 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 DLGAP2Q9P1A6 1054 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 NARFQ9UHQ1 456 aa21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CORO1CQ9ULV4 474 aaPredicted RBP21.86■■□□□ 1.09
MAP1LC3B-206ENST00000564844 STRCQ7RTU9 1775 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GOLGA8SH3BPF8 625 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GOLGA8MH3BSY2 632 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BANF1O75531 89 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GNAT1P11488 350 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 KIF22Q14807 665 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 POLLQ9UGP5 575 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 FRMPD4Q14CM0 1322 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SPATA31A1Q5TZJ5 1347 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 KRT5P13647 590 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GABPAQ06546 454 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 FASTKD3Q14CZ7 662 aaKnown RBP21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TMEM154Q6P9G4 183 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 C1orf186Q6ZWK4 172 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 LMO3Q8TAP4 145 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 EPS8L1Q8TE68 723 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TMEM109Q9BVC6 243 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RNPEPL1Q9HAU8 725 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 NPHS2Q9NP85 383 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 VAV3Q9UKW4 847 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GRID1Q9ULK0 1009 aa21.85■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RFC5P40937 340 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PTDSS1P48651 473 aaKnown RBP21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 AP1ARQ63HQ0 302 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PPP1R18Q6NYC8 613 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 HAUS1Q96CS2 278 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 WNT8AQ9H1J5 351 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 BMT2Q1RMZ1 405 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MUM1Q2TAK8 710 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 C11orf63Q6NUN7 778 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 FAM196AQ6ZSG2 479 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CPA5Q8WXQ8 436 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SNF8Q96H20 258 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MAGEB18Q96M61 343 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PI4K2AQ9BTU6 479 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 DENND2DQ9H6A0 471 aaPredicted RBP21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 UBN1Q9NPG3 1134 aa21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TOPORSQ9NS56 1045 aaPredicted RBP21.84■■□□□ 1.09
MAP1LC3B-206ENST00000564844 ETS1P14921 441 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CALB2P22676 271 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 IL9RQ01113 521 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 STRN3Q13033 797 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CCDC6Q16204 474 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PKN2Q16513 984 aaKnown RBP21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TAF1BQ53T94 588 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CYFIP1Q7L576 1253 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CROCCP2Q86T23 111 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 GLIS1Q8NBF1 620 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PLEKHO2Q8TD55 490 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 SAYSD1Q9NPB0 183 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 MYH11P35749 1972 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 EXOC1LA0A1B0GW35 172 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TPBGLP0DKB5 382 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 HSPA6P17066 643 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 CA4P22748 312 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RPA3P35244 121 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 FBXO11Q86XK2 927 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 RAB3IPQ96QF0 476 aaPredicted RBP21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 TSC22D3Q99576 134 aa21.83■■□□□ 1.09
MAP1LC3B-206ENST00000564844 PI4K2BG5E9Z4 385 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 VAMP7P51809 220 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 POLE2P56282 527 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ARMC3Q5W041 872 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ZNF365Q70YC5 407 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 KREMEN1Q96MU8 473 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 OLFML3Q9NRN5 406 aa21.83■■□□□ 1.08
MAP1LC3B-206ENST00000564844 NAV1Q8NEY1 1877 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 A0A1W2PPM1 405 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 RALAP11233 206 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 CD58P19256 250 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 ATP5DP30049 168 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 MAPK4P31152 587 aa21.82■■□□□ 1.08
MAP1LC3B-206ENST00000564844 MTDHQ86UE4 582 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms