RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 U2AF1L4Q8WU68 220 aaKnown RBP27.2■■□□□ 1.94
LINC01003-201ENST00000564834 ANKRD7Q92527 254 aa27.2■■□□□ 1.94
LINC01003-201ENST00000564834 ZIC5Q96T25 663 aa27.2■■□□□ 1.94
LINC01003-201ENST00000564834 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.2■■□□□ 1.94
LINC01003-201ENST00000564834 SAR1BQ9Y6B6 198 aa27.2■■□□□ 1.94
LINC01003-201ENST00000564834 V9GYY5 206 aaPredicted RBP27.2■■□□□ 1.94
LINC01003-201ENST00000564834 KIF3CO14782 793 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 B4GALT5O43286 388 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 BUB1O43683 1085 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 ZEB2O60315 1214 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 VTNP04004 478 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 IQCF3P0C7M6 154 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 SURF1Q15526 300 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 TMEM132AQ24JP5 1023 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 WDR44Q5JSH3 913 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 WDR49Q8IV35 697 aa27.19■■□□□ 1.94
LINC01003-201ENST00000564834 H2AFZP0C0S5 128 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 TNFAIP3P21580 790 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 CPT1AP50416 773 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 NAP1L1P55209 391 aaKnown RBP27.18■■□□□ 1.94
LINC01003-201ENST00000564834 H2AFVQ71UI9 128 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 SRGAP1Q7Z6B7 1085 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 TATDN2Q93075 761 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 FAM84AQ96KN4 292 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 AGPAT1Q99943 283 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 PI4K2AQ9BTU6 479 aa27.18■■□□□ 1.94
LINC01003-201ENST00000564834 VNN1O95497 513 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 CTGFP29279 349 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 USP8P40818 1118 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 AMHR2Q16671 573 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 LENG1Q96BZ8 264 aaPredicted RBP27.17■■□□□ 1.94
LINC01003-201ENST00000564834 HDAC6Q9UBN7 1215 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 NRCAMQ92823 1304 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 ELF2Q15723 593 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 ZNF410Q86VK4 478 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 KIAA0319LQ8IZA0 1049 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 ZNF710Q8N1W2 664 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 EPS8L1Q8TE68 723 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 LMBR1Q8WVP7 490 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 UBXN4Q92575 508 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 KAT2BQ92831 832 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 SETD4Q9NVD3 440 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 PCDHGC5Q9Y5F6 944 aa27.17■■□□□ 1.94
LINC01003-201ENST00000564834 A0A0A6YYK5 440 aaPredicted RBP27.16■■□□□ 1.94
LINC01003-201ENST00000564834 ALDH1A1P00352 501 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 ERCC6LQ2NKX8 1250 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 EEF1DP3Q658K8 133 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 NFRKBQ6P4R8 1299 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 OR5B17Q8NGF7 314 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 NLRP7Q8WX94 980 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 AP5M1Q9H0R1 490 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 CDT1Q9H211 546 aa27.16■■□□□ 1.94
LINC01003-201ENST00000564834 SMIM10L2AP0DMW4 78 aa27.15■■□□□ 1.94
LINC01003-201ENST00000564834 SMIM10L2BP0DMW5 78 aa27.15■■□□□ 1.94
LINC01003-201ENST00000564834 FCGRTP55899 365 aa27.15■■□□□ 1.94
LINC01003-201ENST00000564834 IFI16Q16666 785 aaKnown RBP27.15■■□□□ 1.94
LINC01003-201ENST00000564834 PAXIP1Q6ZW49 1069 aaPredicted RBP27.15■■□□□ 1.94
LINC01003-201ENST00000564834 SLC20A1Q8WUM9 679 aa27.15■■□□□ 1.94
LINC01003-201ENST00000564834 PPP1R16BQ96T49 567 aa27.15■■□□□ 1.94
LINC01003-201ENST00000564834 CYP26A1O43174 497 aa27.14■■□□□ 1.94
LINC01003-201ENST00000564834 THNSL1Q8IYQ7 743 aa27.14■■□□□ 1.94
LINC01003-201ENST00000564834 NOCTQ9UK39 431 aaKnown RBP27.14■■□□□ 1.94
LINC01003-201ENST00000564834 SGPL1O95470 568 aa27.14■■□□□ 1.93
LINC01003-201ENST00000564834 CHMP4BP1P59074 171 aa27.14■■□□□ 1.93
LINC01003-201ENST00000564834 MFSD10Q14728 455 aa27.14■■□□□ 1.93
LINC01003-201ENST00000564834 RSRC2Q7L4I2 434 aaKnown RBP27.14■■□□□ 1.93
LINC01003-201ENST00000564834 SCLT1Q96NL6 688 aa27.14■■□□□ 1.93
LINC01003-201ENST00000564834 SEPT11Q9NVA2 429 aaKnown RBP27.14■■□□□ 1.93
LINC01003-201ENST00000564834 SNX12Q9UMY4 172 aa27.14■■□□□ 1.93
LINC01003-201ENST00000564834 TRIP12Q14669 1992 aaPredicted RBP27.14■■□□□ 1.93
LINC01003-201ENST00000564834 PHACTR2O75167 634 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 PALMO75781 387 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 MCF2P10911 925 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 AKR1A1P14550 325 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 PRLRP16471 622 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 GALCP54803 685 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 CDC42EP1Q00587 391 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 NCOA4Q13772 614 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 CYP4F22Q6NT55 531 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 SLC47A2Q86VL8 602 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 RPUSD2Q8IZ73 545 aaKnown RBP27.13■■□□□ 1.93
LINC01003-201ENST00000564834 GOLGA1Q92805 767 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 ELMO3Q96BJ8 720 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 TSKSQ9UJT2 592 aa27.13■■□□□ 1.93
LINC01003-201ENST00000564834 MBLAC1A4D2B0 266 aaPredicted RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 HAS3O00219 553 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 CSDE1O75534 798 aaKnown RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 TMEM253P0C7T8 217 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 PDE6CP51160 858 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 NOP9Q86U38 636 aaKnown RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 CDR2LQ86X02 465 aaPredicted RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 DNAAF5Q86Y56 855 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 PALB2Q86YC2 1186 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 DHX38Q92620 1227 aaKnown RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 PDZD7Q9H5P4 517 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 PUF60Q9UHX1 559 aaKnown RBP27.12■■□□□ 1.93
LINC01003-201ENST00000564834 CASP8AP2Q9UKL3 1982 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 B4GALT4O60513 344 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 IL18RAPO95256 599 aa27.12■■□□□ 1.93
LINC01003-201ENST00000564834 TFRCP02786 760 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms