RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 ARHGEF19Q8IW93 802 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 OR5B17Q8NGF7 314 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 DHX38Q92620 1227 aaKnown RBP12.18□□□□□ -0.46
SNX29-204ENST00000564791 FAM212AQ96EL1 285 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 ADPGKQ9BRR6 497 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 PAK6Q9NQU5 681 aaPredicted RBP12.18□□□□□ -0.46
SNX29-204ENST00000564791 TRMT13Q9NUP7 481 aaKnown RBP12.18□□□□□ -0.46
SNX29-204ENST00000564791 APEX2Q9UBZ4 518 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 COQ4Q9Y3A0 265 aa12.18□□□□□ -0.46
SNX29-204ENST00000564791 MEFVO15553 781 aaPredicted RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 NPTXRO95502 500 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 C4BPAP04003 597 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 CLTAP09496 248 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 CCL5P13501 91 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 JAM2P57087 298 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 NCBP1Q09161 790 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 MGAT3Q09327 533 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 ZACNQ401N2 412 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 SFMBT2Q5VUG0 894 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 TDRD10Q5VZ19 366 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 NOTUMQ6P988 496 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 SLC27A1Q6PCB7 646 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 FAM228AQ86W67 206 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 WDR49Q8IV35 697 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 FBXL13Q8NEE6 735 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 SPAG5Q96R06 1193 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 SENP6Q9GZR1 1112 aaPredicted RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 NUCKS1Q9H1E3 243 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 RPF1Q9H9Y2 349 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.17□□□□□ -0.461e-6■■■■■ 117.3
SNX29-204ENST00000564791 STARD7Q9NQZ5 370 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 DNAJC12Q9UKB3 198 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 PIN4Q9Y237 131 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 NOD1Q9Y239 953 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 NOC2LQ9Y3T9 749 aaKnown RBP12.17□□□□□ -0.46
SNX29-204ENST00000564791 CEP350Q5VT06 3117 aa12.17□□□□□ -0.46
SNX29-204ENST00000564791 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 USP27XA6NNY8 438 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 VNN1O95497 513 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 HLA-DRAP01903 254 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 CHRNA1P02708 482 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 RPLP2P05387 115 aaKnown RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 AXLP30530 894 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 THPOP40225 353 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 CDK17Q00537 523 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 PTK7Q13308 1070 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 BIRC3Q13489 604 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 SURF1Q15526 300 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 KYAT1Q16773 422 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 PHLDB3Q6NSJ2 640 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 EFCAB13Q8IY85 973 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 CCAR2Q8N163 923 aaKnown RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 SYN2Q92777 582 aaPredicted RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 DEFB118Q96PH6 123 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 DESI2Q9BSY9 194 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 EIF2AQ9BY44 585 aaKnown RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 SPTLC3Q9NUV7 552 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 RAB20Q9NX57 234 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 MYO6Q9UM54 1294 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 DAAM1Q9Y4D1 1078 aa12.16□□□□□ -0.46
SNX29-204ENST00000564791 PDCD11Q14690 1871 aaKnown RBP12.16□□□□□ -0.46
SNX29-204ENST00000564791 DNAH12Q6ZR08 3092 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 IL18RAPO95256 599 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 PLEKP08567 350 aaPredicted RBP12.15□□□□□ -0.46
SNX29-204ENST00000564791 PNMA6AP0CW24 399 aaPredicted RBP12.15□□□□□ -0.46
SNX29-204ENST00000564791 HSPA8P11142 646 aaKnown RBP12.15□□□□□ -0.46
SNX29-204ENST00000564791 RFX1P22670 979 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 GRM5P41594 1212 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 PIK3CAP42336 1068 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 ASIC2Q16515 512 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 APBB1IPQ7Z5R6 666 aaPredicted RBP12.15□□□□□ -0.46
SNX29-204ENST00000564791 ELMO3Q96BJ8 720 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 STK33Q9BYT3 514 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 MTMR12Q9C0I1 747 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 GPR88Q9GZN0 384 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 RNF208Q9H0X6 261 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 TRPV6Q9H1D0 765 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.46
SNX29-204ENST00000564791 AIPL1Q9NZN9 384 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 ARHGAP20Q9P2F6 1191 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 MROH7Q68CQ1 1323 aa12.15□□□□□ -0.46
SNX29-204ENST00000564791 LACTBL1A8MY62 500 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 F8VZ95 297 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 DNM1LO00429 736 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 B4GALT4O60513 344 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 AP3M2P53677 418 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 TFAMQ00059 246 aaKnown RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 POU5F1Q01860 360 aaKnown RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 ARID5AQ03989 594 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 DRAP1Q14919 205 aaPredicted RBP12.15□□□□□ -0.47
SNX29-204ENST00000564791 ARHGAP44Q17R89 818 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 SLC10A6Q3KNW5 377 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 UBXN11Q5T124 520 aa12.15□□□□□ -0.47
SNX29-204ENST00000564791 HGSNATQ68CP4 663 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms