RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 ANKS4BQ8N8V4 417 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 C12orf50Q8NA57 414 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 GIMAP7Q8NHV1 300 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 ATG4AQ8WYN0 398 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 TACO1Q9BSH4 297 aaKnown RBP16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 CHST7Q9NS84 486 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 FSCN2O14926 492 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 LYPLA2O95372 231 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 CREB1P16220 341 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 CHKAP35790 457 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 GPC3P51654 580 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 SOX10P56693 466 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 LRRC14Q15048 493 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 TRIP13Q15645 432 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 CNGA2Q16280 664 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 ZNF568Q3ZCX4 644 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 ACAD10Q6JQN1 1059 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 CROCCP2Q86T23 111 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 P3H4Q92791 437 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 SGSM3Q96HU1 749 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 RUNDC3BQ96NL0 473 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 NT5C1BQ96P26 610 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 PI4K2AQ9BTU6 479 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 TMEM8AQ9HCN3 771 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 DNAJC17Q9NVM6 304 aaKnown RBP16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 RAB20Q9NX57 234 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 ANAPC7Q9UJX3 599 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 COQ4Q9Y3A0 265 aa16.56■□□□□ 0.24
GTF3C1-205ENST00000564747 FOXO6A8MYZ6 492 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 KRT5P13647 590 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 NPTX2P47972 431 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 XRCC4Q13426 336 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 NEDD9Q14511 834 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 FBXL13Q8NEE6 735 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 TAAR1Q96RJ0 339 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 IWS1Q96ST2 819 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 HERPUD2Q9BSE4 406 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 ASIC3Q9UHC3 531 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 GHRP10912 638 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 MYCLP12524 364 aaPredicted RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SNRPFP62306 86 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SNCBQ16143 134 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 C2CD6Q53TS8 623 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 PCNX4Q63HM2 1172 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 LLGL2Q6P1M3 1020 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SV2AQ7L0J3 742 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 NIPA1Q7RTP0 329 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 FAM228AQ86W67 206 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 C4orf19Q8IY42 314 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 MGARPQ8TDB4 240 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 STMN4Q9H169 189 aaPredicted RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 CCDC134Q9H6E4 229 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SAMD15Q9P1V8 674 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 DENND3A2RUS2 1198 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 CCNE2O96020 404 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 MAPK4P31152 587 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 DGKZQ13574 1117 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 PREPLQ4J6C6 727 aaPredicted RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 MFSD5Q6N075 450 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SLC39A4Q6P5W5 647 aa16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 TRMT10CQ7L0Y3 403 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SYTL5Q8TDW5 730 aaPredicted RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 RAVER2Q9HCJ3 691 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 SCAF8Q9UPN6 1271 aaKnown RBP16.55■□□□□ 0.24
GTF3C1-205ENST00000564747 ZNFX1Q9P2E3 1918 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 CLEC16AQ2KHT3 1053 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 TAOK1Q7L7X3 1001 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 MAP4K3Q8IVH8 894 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 BSNDQ8WZ55 320 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 KIFAP3Q92845 792 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 ROPN1BQ9BZX4 212 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 ROPN1Q9HAT0 212 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 TBC1D22BQ9NU19 505 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 TPX2Q9ULW0 747 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 C21orf2O43822 256 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 DNAJC8O75937 253 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 SCP2P22307 547 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 PSMC5P62195 406 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 RSBN1LQ6PCB5 846 aaPredicted RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 CPA5Q8WXQ8 436 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 ARHGEF2Q92974 986 aaKnown RBP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 PWWP2AQ96N64 755 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 WHRNQ9P202 907 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 CTNNAL1Q9UBT7 734 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 EXOC7Q9UPT5 735 aa16.54■□□□□ 0.24
GTF3C1-205ENST00000564747 IVDP26440 423 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 HSPA1LP34931 641 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 RPS6P62753 249 aaKnown RBP16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 ITIH4Q14624 930 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 RHBDF2Q6PJF5 856 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 ANO5Q75V66 913 aa16.53■□□□□ 0.24
GTF3C1-205ENST00000564747 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms