RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 SMIM28A0A1B0GU29 152 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 TTC26A0AVF1 554 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 EIF3DO15371 548 aaKnown RBP eCLIP18.9■□□□□ 0.62
USB1-209ENST00000564387 CLTAP09496 248 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 HOXD13P35453 343 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 YARSP54577 528 aaKnown RBP18.9■□□□□ 0.62
USB1-209ENST00000564387 CCDC85BQ15834 202 aaPredicted RBP18.9■□□□□ 0.62
USB1-209ENST00000564387 FAM26FQ5R3K3 315 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 GLIS3Q8NEA6 775 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 HPS3Q969F9 1004 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 TMEM169Q96HH4 297 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 IKZF4Q9H2S9 585 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 EXOC7Q9UPT5 735 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 IRAK3Q9Y616 596 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 TRIP11Q15643 1979 aa18.9■□□□□ 0.62
USB1-209ENST00000564387 TISP43B9A030 160 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 OSTNP61366 133 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 POSTNQ15063 836 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 TCEAL5Q5H9L2 206 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 ZMAT2Q96NC0 199 aaKnown RBP18.89■□□□□ 0.61
USB1-209ENST00000564387 TMEM206Q9H813 350 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 NGRNQ9NPE2 291 aaKnown RBP18.89■□□□□ 0.61
USB1-209ENST00000564387 CPSF3Q9UKF6 684 aaKnown RBP18.89■□□□□ 0.61
USB1-209ENST00000564387 CITO14578 2027 aa18.89■□□□□ 0.61
USB1-209ENST00000564387 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.88■□□□□ 0.61
USB1-209ENST00000564387 ZBTB6Q15916 424 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 BMT2Q1RMZ1 405 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 CTC1Q2NKJ3 1217 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 SEZ6Q53EL9 994 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 CLEC17AQ6ZS10 378 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 STXBP4Q6ZWJ1 553 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 MICALL1Q8N3F8 863 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 TSPAN18Q96SJ8 248 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 MSTO1Q9BUK6 570 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 ZBP1Q9H171 429 aa18.88■□□□□ 0.61
USB1-209ENST00000564387 TMEM189-UBE2V1I3L0A0 370 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 NCK2O43639 380 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 NR1I2O75469 434 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 PRPF6O94906 941 aaKnown RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 UBE4BO95155 1302 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 CTSAP10619 480 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 HARSP12081 509 aaKnown RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 GARTP22102 1010 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 TNFSF9P41273 254 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 OR1G1P47890 313 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 FAM160A1Q05DH4 1040 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 HYAL1Q12794 435 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 DPYDQ12882 1025 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 PSMD2Q13200 908 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 PDCD11Q14690 1871 aaKnown RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 ENOX2Q16206 610 aaKnown RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 ZBTB41Q5SVQ8 909 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 KANK3Q6NY19 840 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 CRELD2Q6UXH1 353 aaPredicted RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 GPR65Q8IYL9 337 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 VPS52Q8N1B4 723 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 MRPL43Q8N983 215 aaKnown RBP18.87■□□□□ 0.61
USB1-209ENST00000564387 SCFD1Q8WVM8 642 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 PPM1EQ8WY54 764 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 TIGD1Q96MW7 591 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 TCF25Q9BQ70 676 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 PAAF1Q9BRP4 392 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 COLEC11Q9BWP8 271 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 SLC38A7Q9NVC3 462 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 COG5Q9UP83 839 aa18.87■□□□□ 0.61
USB1-209ENST00000564387 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 F8W810 466 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 LILRB3O75022 631 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 CXCL8P10145 99 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 SOX4Q06945 474 aaPredicted RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 KCNC3Q14003 757 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 HSP90AA2PQ14568 343 aaPredicted RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 UPP1Q16831 310 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 KMT5BQ4FZB7 885 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 ADGRD2Q7Z7M1 963 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 CD302Q8IX05 232 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 ELOA2Q8IYF1 753 aaPredicted RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 PABPC5Q96DU9 382 aaKnown RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 UROC1Q96N76 676 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 PRDM6Q9NQX0 595 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 TSHZ2Q9NRE2 1034 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 CHST7Q9NS84 486 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 ADAM28Q9UKQ2 775 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 AGO2Q9UKV8 859 aaKnown RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 PRG3Q9Y2Y8 225 aaPredicted RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 PCDHGC5Q9Y5F6 944 aa18.86■□□□□ 0.61
USB1-209ENST00000564387 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.86■□□□□ 0.61
USB1-209ENST00000564387 C2orf71A6NGG8 1288 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 TGFB1I1O43294 461 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 RHOBTB3O94955 611 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 SOD2P04179 222 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 PRR29P0C7W0 189 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 MATR3P43243 847 aaKnown RBP eCLIP18.85■□□□□ 0.61
USB1-209ENST00000564387 SNRPFP62306 86 aaKnown RBP18.85■□□□□ 0.61
USB1-209ENST00000564387 STK4Q13043 487 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 SMC1AQ14683 1233 aaKnown RBP18.85■□□□□ 0.61
USB1-209ENST00000564387 CD300LGQ6UXG3 332 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 TMC7Q7Z402 723 aa18.85■□□□□ 0.61
USB1-209ENST00000564387 TMEM174Q8WUU8 243 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms