RNA–Protein interactions for RNA: ENST00000563410.1

CHD9-208, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-208ENST00000563410 AOC1P19801 751 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 IGFBP6P24592 240 aaPredicted RBP23.09■■□□□ 1.29
CHD9-208ENST00000563410 PDIA5Q14554 519 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 FAM171A1Q5VUB5 890 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 IGSF22Q8N9C0 903 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 FAM184AQ8NB25 1140 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 KIFAP3Q92845 792 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 IFT74Q96LB3 600 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 PIDD1Q9HB75 910 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 DDX19AQ9NUU7 478 aaKnown RBP23.09■■□□□ 1.29
CHD9-208ENST00000563410 NOL7Q9UMY1 257 aaKnown RBP23.09■■□□□ 1.29
CHD9-208ENST00000563410 PCDHB6Q9Y5E3 794 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 FAM186AA6NE01 2351 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 MYH15Q9Y2K3 1946 aa23.09■■□□□ 1.29
CHD9-208ENST00000563410 PROB1E7EW31 1015 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 EFNA5P52803 228 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 PTGDRQ13258 359 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 PSMD5Q16401 504 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 DCAF4L1Q3SXM0 396 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 ATF7IP2Q5U623 682 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 CEP57Q86XR8 500 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 SIX5Q8N196 739 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 SLC44A3Q8N4M1 653 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 FBXL21Q9UKT6 434 aa23.08■■□□□ 1.29
CHD9-208ENST00000563410 ADAM12O43184 909 aa23.07■■□□□ 1.28
CHD9-208ENST00000563410 GFRA3O60609 400 aa23.07■■□□□ 1.28
CHD9-208ENST00000563410 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
CHD9-208ENST00000563410 PPP1R10Q96QC0 940 aaKnown RBP23.07■■□□□ 1.28
CHD9-208ENST00000563410 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.07■■□□□ 1.286e-7■■■■□ 19.3
CHD9-208ENST00000563410 E9PMD0 336 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 ST18O60284 1047 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 CFHP08603 1231 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 LAMP2P13473 410 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 ELAVL2Q12926 359 aaKnown RBP23.06■■□□□ 1.28
CHD9-208ENST00000563410 IL17AQ16552 155 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 GLRA4Q5JXX5 417 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 CD300LGQ6UXG3 332 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 GET4Q7L5D6 327 aaPredicted RBP23.06■■□□□ 1.28
CHD9-208ENST00000563410 DAW1Q8N136 415 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 NXPE3Q969Y0 559 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 WNT16Q9UBV4 365 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 TNFSF13BQ9Y275 285 aa23.06■■□□□ 1.28
CHD9-208ENST00000563410 PDCD11Q14690 1871 aaKnown RBP23.06■■□□□ 1.28
CHD9-208ENST00000563410 KRBA1A5PL33 1030 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 PP2D1A8MPX8 630 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 TMEM189-UBE2V1I3L0A0 370 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 K7ERI5 159 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 NBL1P41271 181 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 CEP120Q8N960 986 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 DAXXQ9UER7 740 aaPredicted RBP23.05■■□□□ 1.28
CHD9-208ENST00000563410 STK24Q9Y6E0 443 aa23.05■■□□□ 1.28
CHD9-208ENST00000563410 ANHXE9PGG2 379 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 SRFP11831 508 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 FGFR3P22607 806 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 NPTX2P47972 431 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 CLCNKBP51801 687 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 PEX3P56589 373 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 HTR4Q13639 388 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 C8orf34Q49A92 452 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.04■■□□□ 1.28
CHD9-208ENST00000563410 TAS1R3Q7RTX0 852 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 GRASPQ7Z6J2 395 aaPredicted RBP23.04■■□□□ 1.28
CHD9-208ENST00000563410 ACO2Q99798 780 aaKnown RBP23.04■■□□□ 1.28
CHD9-208ENST00000563410 RTP3Q9BQQ7 232 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 GOLGA2P5Q9HBQ8 144 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 PTPRHQ9HD43 1115 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 SPTBN4Q9H254 2564 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 PHLPP2Q6ZVD8 1323 aa23.04■■□□□ 1.28
CHD9-208ENST00000563410 C8AP07357 584 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 HNRNPA1P09651 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
CHD9-208ENST00000563410 CDC25AP30304 524 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 NTHL1P78549 312 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 MAPK7Q13164 816 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 UPP1Q16831 310 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 PDXDC1Q6P996 788 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 DCLRE1AQ6PJP8 1040 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 ALKAL1Q6UXT8 129 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 ASCL5Q7RTU5 278 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 KCNK18Q7Z418 384 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 CCDC105Q8IYK2 499 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 C3orf58Q8NDZ4 430 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 ST13P5Q8NFI4 369 aaPredicted RBP23.03■■□□□ 1.28
CHD9-208ENST00000563410 MMTAG2Q9BU76 263 aaKnown RBP23.03■■□□□ 1.28
CHD9-208ENST00000563410 RAB34Q9BZG1 259 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 CDT1Q9H211 546 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.03■■□□□ 1.28
CHD9-208ENST00000563410 ARHGAP28Q9P2N2 729 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 DNM3Q9UQ16 869 aa23.03■■□□□ 1.28
CHD9-208ENST00000563410 SMIM28A0A1B0GU29 152 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 CCDC169A6NNP5 214 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 LAD1O00515 517 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 HIP1RO75146 1068 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 B3GAT3O94766 335 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 FSHRP23945 695 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 HOXA9P31269 272 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 OR1D2P34982 312 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 PRPHP41219 470 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 GRM5P41594 1212 aa23.02■■□□□ 1.28
CHD9-208ENST00000563410 SOX4Q06945 474 aaPredicted RBP23.02■■□□□ 1.28
CHD9-208ENST00000563410 RAB33AQ14088 237 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms