RNA–Protein interactions for RNA: ENST00000563308.1

SNX29-202, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-202ENST00000563308 CCDC6Q16204 474 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 CALCRLQ16602 461 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 NOMO2Q5JPE7 1267 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 KIAA1211LQ6NV74 962 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 OTUD6AQ7L8S5 288 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 SRGAP1Q7Z6B7 1085 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 ZNF280BQ86YH2 543 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 EXOC8Q8IYI6 725 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 ASAP3Q8TDY4 903 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 HNRNPLLQ8WVV9 542 aaKnown RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 VN1R3Q9BXE9 311 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 MRPL9Q9BYD2 267 aaKnown RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 ARRDC1-AS1Q9H2J1 176 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 NRDE2Q9H7Z3 1164 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 TTC12Q9H892 705 aaPredicted RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 ANKEF1Q9NU02 776 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.24□□□□□ -0.61
SNX29-202ENST00000563308 PCDHA12Q9UN75 941 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 LIMCH1Q9UPQ0 1083 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 MTF2Q9Y483 593 aaPredicted RBP11.24□□□□□ -0.61
SNX29-202ENST00000563308 PCDHB2Q9Y5E7 798 aa11.24□□□□□ -0.61
SNX29-202ENST00000563308 GIPC1O14908 333 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 NEMFO60524 1076 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 GALTP07902 379 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 SPATA31C1P0DKV0 1188 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 SKIP12755 728 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 CEACAM1P13688 526 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 ARL2P36404 184 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 TXKP42681 527 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 RAB27AP51159 221 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 PTENP60484 403 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 GPC5P78333 572 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 GUCY1B3Q02153 619 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 MTAPQ13126 283 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 AMHR2Q16671 573 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 SH3PXD2AQ5TCZ1 1133 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 GLB1LQ6UWU2 654 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 IFNLR1Q8IU57 520 aaPredicted RBP11.23□□□□□ -0.61
SNX29-202ENST00000563308 RNF149Q8NC42 400 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 SMG8Q8ND04 991 aaKnown RBP11.23□□□□□ -0.61
SNX29-202ENST00000563308 TCP11Q8WWU5 503 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 RSPH1Q8WYR4 309 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 TMEM169Q96HH4 297 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 IGSF21Q96ID5 467 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 UBL7Q96S82 380 aaPredicted RBP11.23□□□□□ -0.61
SNX29-202ENST00000563308 DDX23Q9BUQ8 820 aaKnown RBP11.23□□□□□ -0.61
SNX29-202ENST00000563308 PIDD1Q9HB75 910 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 DNAJB4Q9UDY4 337 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 DPP7Q9UHL4 492 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 WASF3Q9UPY6 502 aa11.23□□□□□ -0.61
SNX29-202ENST00000563308 TK2O00142 265 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 ASAP2O43150 1006 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 TSPAN1O60635 241 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 EIF5BO60841 1220 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNX29-202ENST00000563308 CLUHO75153 1309 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 DDHD2O94830 711 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 CD72P21854 359 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 SLC11A1P49279 550 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 ALDH7A1P49419 539 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 RARRES1P49788 294 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 MBTD1Q05BQ5 628 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 POU5F1BQ06416 359 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 CAPSQ13938 189 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 CYP26C1Q6V0L0 522 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 ZNF852Q6ZMS4 543 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 DDX53Q86TM3 631 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 CCDC83Q8IWF9 413 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 FAM160A2Q8N612 972 aaPredicted RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 PIGOQ8TEQ8 1089 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 AUTS2Q8WXX7 1259 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 CLDN23Q96B33 292 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 MTRQ99707 1265 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 IER2Q9BTL4 223 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 EMILIN2Q9BXX0 1053 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 EIF2AQ9BY44 585 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 ZBP1Q9H171 429 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 RNF39Q9H2S5 420 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 CLMPQ9H6B4 373 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 WDR6Q9NNW5 1121 aaKnown RBP11.22□□□□□ -0.61
SNX29-202ENST00000563308 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 IRAK3Q9Y616 596 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 MYO18BQ8IUG5 2567 aa11.22□□□□□ -0.61
SNX29-202ENST00000563308 ARID2Q68CP9 1835 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 ITPR1Q14643 2758 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 INPPL1O15357 1258 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 HYAL3O43820 417 aaPredicted RBP11.21□□□□□ -0.61
SNX29-202ENST00000563308 LILRB3O75022 631 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 MED24O75448 989 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 DGAT1O75907 488 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 PRB1P04280 392 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
SNX29-202ENST00000563308 LAMP2P13473 410 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 ATP2B1P20020 1258 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 GLRA2P23416 452 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 KLRC2P26717 231 aa11.21□□□□□ -0.61
SNX29-202ENST00000563308 MCM7P33993 719 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms