RNA–Protein interactions for RNA: ENST00000563255.1

CDH11-207, Transcript of cadherin 11, humanhuman

TSL 5

Gene CDH11, Length 545 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-207ENST00000563255 CXCL10P02778 98 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 ADRB2P07550 413 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 TPM2P07951 284 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 KRT13P13646 458 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 COL9A1P20849 921 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 RFC2P35250 354 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 GRM5P41594 1212 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 COPB1P53618 953 aaKnown RBP16.03■□□□□ 0.16
CDH11-207ENST00000563255 CCL23P55773 120 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 UBASH3AP57075 661 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 CYP24A1Q07973 514 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 BFSP1Q12934 665 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 SURF1Q15526 300 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 FILIP1LQ4L180 1135 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 PLEKHG4Q58EX7 1191 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
CDH11-207ENST00000563255 USP37Q86T82 979 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 THNSL1Q8IYQ7 743 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 TMC2Q8TDI7 906 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 APBB2Q92870 758 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 GAS2L1Q99501 681 aaPredicted RBP16.03■□□□□ 0.16
CDH11-207ENST00000563255 IFIH1Q9BYX4 1025 aaKnown RBP16.03■□□□□ 0.16
CDH11-207ENST00000563255 WNT8AQ9H1J5 351 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 TMX1Q9H3N1 280 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 PRDM12Q9H4Q4 367 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 MSRAQ9UJ68 235 aa16.03■□□□□ 0.16
CDH11-207ENST00000563255 A0A1B0GTH6 734 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 AP5Z1O43299 807 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 CBFA2T2O43439 604 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 CLTAP09496 248 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 HARSP12081 509 aaKnown RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 TNFSF9P41273 254 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 VAMP7P51809 220 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 PSMD6Q15008 389 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 VWA3BQ502W6 1294 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 MIIPQ5JXC2 388 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 OTOP2Q7RTS6 562 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 BRSK2Q8IWQ3 736 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 CEP120Q8N960 986 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 PARD3BQ8TEW8 1205 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 HERVK_113Q902F9 699 aa16.02■□□□□ 0.16
CDH11-207ENST00000563255 CCDC94Q9BW85 323 aaPredicted RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 EIF2AQ9BY44 585 aaKnown RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 TRIM6Q9C030 488 aaPredicted RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 MTIF3Q9H2K0 278 aaKnown RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 CXXC1Q9P0U4 656 aaPredicted RBP16.02■□□□□ 0.16
CDH11-207ENST00000563255 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDH11-207ENST00000563255 TTC3P53804 2025 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 ZNF623O75123 536 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 STAG3L1P0CL83 205 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 SKIP12755 728 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 RAB27AP51159 221 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 CLDN10P78369 228 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 PLCB2Q00722 1185 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 NR1I3Q14994 352 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 RAB30Q15771 203 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 SEZ6Q53EL9 994 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 ZBTB41Q5SVQ8 909 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 CD302Q8IX05 232 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 SEPT8Q92599 483 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 SLC35C1Q96A29 364 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 SCLYQ96I15 445 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 ACAP3Q96P50 834 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 TRIM5Q9C035 493 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 VPS16Q9H269 839 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 NDST4Q9H3R1 872 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 RPF1Q9H9Y2 349 aaKnown RBP16.01■□□□□ 0.15
CDH11-207ENST00000563255 RTN4Q9NQC3 1192 aaKnown RBP16.01■□□□□ 0.15
CDH11-207ENST00000563255 RGS18Q9NS28 235 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 TAB2Q9NYJ8 693 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
CDH11-207ENST00000563255 IFNKQ9P0W0 207 aa16.01■□□□□ 0.15
CDH11-207ENST00000563255 FNDC1Q4ZHG4 1894 aaPredicted RBP16■□□□□ 0.15
CDH11-207ENST00000563255 A0A0U1RQF3 1178 aa16■□□□□ 0.15
CDH11-207ENST00000563255 STX10O60499 249 aa16■□□□□ 0.15
CDH11-207ENST00000563255 MGEA5O60502 916 aa16■□□□□ 0.15
CDH11-207ENST00000563255 IL18RAPO95256 599 aa16■□□□□ 0.15
CDH11-207ENST00000563255 TPM3P06753 285 aa16■□□□□ 0.15
CDH11-207ENST00000563255 KCNH2Q12809 1159 aa16■□□□□ 0.15
CDH11-207ENST00000563255 CCDC85BQ15834 202 aaPredicted RBP16■□□□□ 0.15
CDH11-207ENST00000563255 TJAP1Q5JTD0 557 aa16■□□□□ 0.15
CDH11-207ENST00000563255 MRPL10Q7Z7H8 261 aaKnown RBP16■□□□□ 0.15
CDH11-207ENST00000563255 SMG8Q8ND04 991 aaKnown RBP16■□□□□ 0.15
CDH11-207ENST00000563255 DBF4BQ8NFT6 615 aa16■□□□□ 0.15
CDH11-207ENST00000563255 NAP1L5Q96NT1 182 aaPredicted RBP16■□□□□ 0.15
CDH11-207ENST00000563255 ADAM2Q99965 735 aa16■□□□□ 0.15
CDH11-207ENST00000563255 XPO4Q9C0E2 1151 aaKnown RBP16■□□□□ 0.15
CDH11-207ENST00000563255 NKX2-4Q9H2Z4 354 aa16■□□□□ 0.15
CDH11-207ENST00000563255 SLC28A3Q9HAS3 691 aa16■□□□□ 0.15
CDH11-207ENST00000563255 PLEKHA5Q9HAU0 1116 aa16■□□□□ 0.15
CDH11-207ENST00000563255 C1orf112Q9NSG2 853 aa16■□□□□ 0.15
CDH11-207ENST00000563255 IPPQ9Y573 584 aa16■□□□□ 0.15
CDH11-207ENST00000563255 PCDHB2Q9Y5E7 798 aa16■□□□□ 0.15
CDH11-207ENST00000563255 MYO9BQ13459 2157 aa15.99■□□□□ 0.15
CDH11-207ENST00000563255 LGALS16A8MUM7 142 aa15.99■□□□□ 0.15
CDH11-207ENST00000563255 PMM2O15305 246 aa15.99■□□□□ 0.15
CDH11-207ENST00000563255 AFPP02771 609 aaKnown RBP15.99■□□□□ 0.15
CDH11-207ENST00000563255 IGFBP4P22692 258 aa15.99■□□□□ 0.15
CDH11-207ENST00000563255 GTF2H1P32780 548 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms