RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 RAB33AQ14088 237 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 MAPK6Q16659 721 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 CDR2LQ86X02 465 aaPredicted RBP17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 PIGOQ8TEQ8 1089 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 PAAF1Q9BRP4 392 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 FOXQ1Q9C009 403 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 PCDHGA2Q9Y5H1 932 aa17.4■□□□□ 0.38
HERPUD1-205ENST00000562914 EP300Q09472 2414 aaPredicted RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 FANCMQ8IYD8 2048 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 CASTOR2A6NHX0 329 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 PTGESO14684 152 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 NCAM2O15394 837 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 GLULP15104 373 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 TXKP42681 527 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 PRPF4BQ13523 1007 aaKnown RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 SNW1Q13573 536 aaKnown RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 TMEM132AQ24JP5 1023 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 SLC44A4Q53GD3 710 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 AXDND1Q5T1B0 1012 aaPredicted RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 APBB1IPQ7Z5R6 666 aaPredicted RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 SUMF1Q8NBK3 374 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 RABGGTAQ92696 567 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 UROC1Q96N76 676 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 MTMR9Q96QG7 549 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 NACC1Q96RE7 527 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 RPP25Q9BUL9 199 aaKnown RBP17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 DLL3Q9NYJ7 618 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 TPCN1Q9ULQ1 816 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 POLIQ9UNA4 740 aa17.39■□□□□ 0.37
HERPUD1-205ENST00000562914 ACKR2O00590 384 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 CCL16O15467 120 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 TRAPPC3O43617 180 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 RECQL4O94761 1208 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 FGFR3P22607 806 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 NAMPTP43490 491 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 NAB2Q15742 525 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 DCAF4L1Q3SXM0 396 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 PABPC1LQ4VXU2 614 aaKnown RBP17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 MAML2Q8IZL2 1156 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 SLC7A14Q8TBB6 771 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 HASPINQ8TF76 798 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 SECISBP2LQ93073 1101 aaKnown RBP17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 PDZD7Q9H5P4 517 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 SPATA6Q9NWH7 488 aaPredicted RBP17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 SNTG2Q9NY99 539 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 GDE1Q9NZC3 331 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 MTRRQ9UBK8 725 aa17.38■□□□□ 0.37
HERPUD1-205ENST00000562914 FAM205CA6NFA0 338 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 ECI2O75521 394 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 CTDNEP1O95476 244 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 OR1D2P34982 312 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 RPS9P46781 194 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 TRIM29Q14134 588 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 UBXN2BQ14CS0 331 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 ZBTB41Q5SVQ8 909 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 ANKS3Q6ZW76 656 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 POLR3CQ9BUI4 534 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 LTB4R2Q9NPC1 389 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 GPRC5CQ9NQ84 441 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 AVENQ9NQS1 362 aaPredicted RBP17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 MRPS17Q9Y2R5 130 aaKnown RBP17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 BACE2Q9Y5Z0 518 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 MYH15Q9Y2K3 1946 aa17.37■□□□□ 0.37
HERPUD1-205ENST00000562914 POTEMA6NI47 508 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 FAM170BA6NMN3 283 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 PRKCBP05771 671 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 SPATA31C1P0DKV0 1188 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 MUTP22033 750 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 EFNA5P52803 228 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 ANAPC15P60006 121 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 NTHL1P78549 312 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 VARS2Q5ST30 1063 aaKnown RBP17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 MAEAQ7L5Y9 396 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 CATSPER3Q86XQ3 398 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 NPAS3Q8IXF0 933 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 ERMNQ8TAM6 284 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 DEPTORQ8TB45 409 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 ITFG1Q8TB96 612 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 FAM126AQ9BYI3 521 aaPredicted RBP17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 CCDC113Q9H0I3 377 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 CACNG4Q9UBN1 327 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 MRPS23Q9Y3D9 190 aaKnown RBP17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 MIA3Q5JRA6 1907 aa17.36■□□□□ 0.37
HERPUD1-205ENST00000562914 B3GAT3O94766 335 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 FDPSP14324 419 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 CYP11B2P19099 503 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 RPA1P27694 616 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 DIS3L2Q8IYB7 885 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 ZBTB44Q8NCP5 570 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 DNASE1L2Q92874 299 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 CLDN23Q96B33 292 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 IER2Q9BTL4 223 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 ZSCAN32Q9NX65 697 aa17.35■□□□□ 0.37
HERPUD1-205ENST00000562914 NCDNQ9UBB6 729 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms