RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 QPCTQ16769 361 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 TTMPQ5BVD1 217 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 PXDC1Q5TGL8 231 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 RALGPS2Q86X27 583 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 CD302Q8IX05 232 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ELMOD2Q8IZ81 293 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ST13P4Q8IZP2 240 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 ALLCQ8N6M5 410 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 PPM1NQ8N819 430 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 E2F7Q96AV8 911 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 INPP4AQ96PE3 977 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 PHF12Q96QT6 1004 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 RHBGQ9H310 441 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 C8orf33Q9H7E9 229 aaPredicted RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 ARNT2Q9HBZ2 717 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 USP40Q9NVE5 1235 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 GPRC5BQ9NZH0 403 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 IL37Q9NZH6 218 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 TRPM5Q9NZQ8 1165 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 CPNE7Q9UBL6 633 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 CLEC11AQ9Y240 323 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 COQ6Q9Y2Z9 468 aa9.97□□□□□ -0.81
CDH1-205ENST00000562836 MRPL11Q9Y3B7 192 aaKnown RBP9.97□□□□□ -0.81
CDH1-205ENST00000562836 ABCC2Q92887 1545 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 IRS4O14654 1257 aaPredicted RBP9.96□□□□□ -0.81
CDH1-205ENST00000562836 TJP3O95049 919 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 MYZAPP0CAP1 466 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 RFX1P22670 979 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 ADCY7P51828 1080 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 SLC12A2P55011 1212 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 OLR1P78380 273 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 KRT76Q01546 638 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 CDC16Q13042 620 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 BMP2KLQ5H9B9 411 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 HYIQ5T013 277 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 WDR93Q6P2C0 686 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 RIN3Q8TB24 985 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 NOC3LQ8WTT2 800 aaKnown RBP9.96□□□□□ -0.81
CDH1-205ENST00000562836 ZNF606Q8WXB4 792 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 CTRCQ99895 268 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 ESYT1Q9BSJ8 1104 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 CTTNBP2NLQ9P2B4 639 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 ENOPH1Q9UHY7 261 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 FBXO10Q9UK96 956 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 CARMIL2Q6F5E8 1435 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 MYO5CQ9NQX4 1742 aa9.96□□□□□ -0.81
CDH1-205ENST00000562836 ABCA8O94911 1581 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 MAGI2Q86UL8 1455 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDH1-205ENST00000562836 PLEKHA8P1O95397 391 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 CHGBP05060 677 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 ZCCHC18P0CG32 403 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 PTDSS1P48651 473 aaKnown RBP9.96□□□□□ -0.82
CDH1-205ENST00000562836 P2RX3P56373 397 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 CSNK2BP67870 215 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 APBA1Q02410 837 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 SGCGQ13326 291 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 PTK2BQ14289 1009 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 SQLEQ14534 574 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 VARS2Q5ST30 1063 aaKnown RBP9.96□□□□□ -0.82
CDH1-205ENST00000562836 IL17RDQ8NFM7 739 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 ZNF566Q969W8 418 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 FAM149B1Q96BN6 582 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 CAPZA3Q96KX2 299 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 THAP9Q9H5L6 903 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 ATP6V1HQ9UI12 483 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 ERVK-19Q9WJR5 959 aa9.96□□□□□ -0.82
CDH1-205ENST00000562836 SYNMO15061 1565 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 B8ZZF3 427 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 STX10O60499 249 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 KLHL2O95198 593 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 TFRCP02786 760 aaKnown RBP9.95□□□□□ -0.82
CDH1-205ENST00000562836 M6PRP20645 277 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 CRABP2P29373 138 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 LRPAP1P30533 357 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 ARL1P40616 181 aaPredicted RBP9.95□□□□□ -0.82
CDH1-205ENST00000562836 STAT2P52630 851 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 HK2P52789 917 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 CACNB3P54284 484 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 PPARDQ03181 441 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 NR5A1Q13285 461 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 ADRM1Q16186 407 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 NFE2Q16621 373 aaPredicted RBP9.95□□□□□ -0.82
CDH1-205ENST00000562836 KCNT1Q5JUK3 1230 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 AGMOQ6ZNB7 445 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 RIC3Q7Z5B4 369 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 KCTD20Q7Z5Y7 419 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 ZBED8Q8IZ13 594 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 TMEM57Q8N5G2 664 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 FANK1Q8TC84 345 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 NELFBQ8WX92 580 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 RUFY2Q8WXA3 655 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 EFHD2Q96C19 240 aaPredicted RBP9.95□□□□□ -0.82
CDH1-205ENST00000562836 SUCLG2Q96I99 432 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 YME1L1Q96TA2 773 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 VPS37BQ9H9H4 285 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 ZSWIM6Q9HCJ5 1215 aa9.95□□□□□ -0.82
CDH1-205ENST00000562836 TRNAU1APQ9NX07 287 aaKnown RBP9.95□□□□□ -0.82
CDH1-205ENST00000562836 TBC1D14Q9P2M4 693 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms