RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TMEM184AQ6ZMB5 413 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 VN1R2Q8NFZ6 395 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 BCL7CQ8WUZ0 217 aaPredicted RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RIPOR3Q96MK2 946 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 RUSC1Q9BVN2 902 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CCDC94Q9BW85 323 aaPredicted RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 PHF7Q9BWX1 381 aaPredicted RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CCDC113Q9H0I3 377 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 EPHX3Q9H6B9 360 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 C17orf75Q9HAS0 396 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CD320Q9NPF0 282 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 KCND2Q9NZV8 630 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 LARSQ9P2J5 1176 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 ANKFY1Q9P2R3 1169 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 CCDC39Q9UFE4 941 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 DPP7Q9UHL4 492 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 USP20Q9Y2K6 914 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 NR2E1Q9Y466 385 aa10.21□□□□□ -0.77
CHRFAM7A-204ENST00000562729 FAM86C2PA6NEL3 165 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CASTOR2A6NHX0 329 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TULP1O00294 542 aaPredicted RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 DPYSL4O14531 572 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SLC26A4O43511 780 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SF3B1O75533 1304 aaKnown RBP eCLIP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 FAM13AO94988 1023 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PLS3P13797 630 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GUCY2CP25092 1073 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CREMQ03060 361 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TUSC3Q13454 348 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HSP90AA2PQ14568 343 aaPredicted RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PTPN14Q15678 1187 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 USP41Q3LFD5 358 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ATAT1Q5SQI0 421 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 C1orf186Q6ZWK4 172 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 KCNK18Q7Z418 384 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GPBP1Q86WP2 473 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CEP57Q86XR8 500 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SYT2Q8N9I0 419 aaPredicted RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HASPINQ8TF76 798 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 RABGGTAQ92696 567 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 INTS4Q96HW7 963 aaKnown RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 NECTIN4Q96NY8 510 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MMTAG2Q9BU76 263 aaKnown RBP10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HERC2P3Q9BVR0 1158 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MIOSQ9NXC5 875 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ZMYM2Q9UBW7 1377 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ADAM28Q9UKQ2 775 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TNFSF13BQ9Y275 285 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HCN4Q9Y3Q4 1203 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GTF3C3Q9Y5Q9 886 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 IRAK3Q9Y616 596 aa10.2□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PI4K2BG5E9Z4 385 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 INPPL1O15357 1258 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 B4GALT3O60512 393 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CNPP09543 421 aaKnown RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 EPCAMP16422 314 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PLCG1P19174 1290 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SYT1P21579 422 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MARCKSP29966 332 aaPredicted RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MTHFRP42898 656 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 DSC1Q08554 894 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 KARSQ15046 597 aaKnown RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GLRA4Q5JXX5 417 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 HYIQ5T013 277 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 NT5DC1Q5TFE4 455 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 EEF1DP3Q658K8 133 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 FUT10Q6P4F1 479 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 RNF135Q8IUD6 432 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GLYCTKQ8IVS8 523 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MYCT1Q8N699 235 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 RIN2Q8WYP3 895 aaPredicted RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 FBXL18Q96ME1 805 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 KLHL5Q96PQ7 755 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 PNMA5Q96PV4 448 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ADAM7Q9H2U9 754 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ZSCAN16Q9H4T2 348 aaPredicted RBP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TMEM134Q9H6X4 195 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SFXN1Q9H9B4 322 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MARCH5Q9NX47 278 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MUTYHQ9UIF7 546 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 CLIC4Q9Y696 253 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MUC3AQ02505 3323 aa10.19□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MYH11P35749 1972 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 NPHP3-ACAD11A0A0J9YXS1 232 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 K7ENM7 598 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TRAPPC3O43617 180 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 STX6O43752 255 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 GLUD1P00367 558 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MYBP10242 640 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 MCF2P10911 925 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 LIG4P49917 911 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 SLC12A3P55017 1021 aa10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 ELAVL2Q12926 359 aaKnown RBP10.18□□□□□ -0.78
CHRFAM7A-204ENST00000562729 TMEM119Q4V9L6 283 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms