RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
CLK3-209ENST00000562670 FAM207AQ9NSI2 230 aaPredicted RBP15.09■□□□□ 0.01
CLK3-209ENST00000562670 ABHD10Q9NUJ1 306 aa15.09■□□□□ 0.01
CLK3-209ENST00000562670 PIN4Q9Y237 131 aaKnown RBP15.09■□□□□ 0.01
CLK3-209ENST00000562670 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
CLK3-209ENST00000562670 ANK1P16157 1881 aa15.08■□□□□ 0.01
CLK3-209ENST00000562670 CTSHP09668 335 aa15.08■□□□□ 0
CLK3-209ENST00000562670 STAG3L1P0CL83 205 aa15.08■□□□□ 0
CLK3-209ENST00000562670 DLATP10515 647 aaKnown RBP15.08■□□□□ 0
CLK3-209ENST00000562670 CKBP12277 381 aa15.08■□□□□ 0
CLK3-209ENST00000562670 FGFR4P22455 802 aa15.08■□□□□ 0
CLK3-209ENST00000562670 KRT9P35527 623 aa15.08■□□□□ 0
CLK3-209ENST00000562670 CCZ1BP86790 482 aa15.08■□□□□ 0
CLK3-209ENST00000562670 CCZ1P86791 482 aaPredicted RBP15.08■□□□□ 0
CLK3-209ENST00000562670 BFSP2Q13515 415 aa15.08■□□□□ 0
CLK3-209ENST00000562670 MEA1Q16626 185 aa15.08■□□□□ 0
CLK3-209ENST00000562670 KLHDC7AQ5VTJ3 777 aa15.08■□□□□ 0
CLK3-209ENST00000562670 TRAF7Q6Q0C0 670 aa15.08■□□□□ 0
CLK3-209ENST00000562670 SV2AQ7L0J3 742 aa15.08■□□□□ 0
CLK3-209ENST00000562670 CEP120Q8N960 986 aa15.08■□□□□ 0
CLK3-209ENST00000562670 FBXL13Q8NEE6 735 aa15.08■□□□□ 0
CLK3-209ENST00000562670 OR8K1Q8NGG5 319 aa15.08■□□□□ 0
CLK3-209ENST00000562670 BAP1Q92560 729 aa15.08■□□□□ 0
CLK3-209ENST00000562670 SYN2Q92777 582 aaPredicted RBP15.08■□□□□ 0
CLK3-209ENST00000562670 FAM81BQ96LP2 452 aa15.08■□□□□ 0
CLK3-209ENST00000562670 TOX2Q96NM4 488 aa15.08■□□□□ 0
CLK3-209ENST00000562670 CRACR2AQ9BSW2 395 aa15.08■□□□□ 0
CLK3-209ENST00000562670 CCDC94Q9BW85 323 aaPredicted RBP15.08■□□□□ 0
CLK3-209ENST00000562670 INTS2Q9H0H0 1204 aaKnown RBP15.08■□□□□ 0
CLK3-209ENST00000562670 TRPV6Q9H1D0 765 aa15.08■□□□□ 0
CLK3-209ENST00000562670 PDE11AQ9HCR9 933 aa15.08■□□□□ 0
CLK3-209ENST00000562670 APEX2Q9UBZ4 518 aa15.08■□□□□ 0
CLK3-209ENST00000562670 ZKSCAN5Q9Y2L8 839 aa15.08■□□□□ 0
CLK3-209ENST00000562670 DERAQ9Y315 318 aa15.08■□□□□ 0
CLK3-209ENST00000562670 C2CD2Q9Y426 696 aa15.08■□□□□ 0
CLK3-209ENST00000562670 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.08■□□□□ 0
CLK3-209ENST00000562670 TANC1Q9C0D5 1861 aa15.08■□□□□ 0
CLK3-209ENST00000562670 EPHB6O15197 1021 aa15.07■□□□□ 0
CLK3-209ENST00000562670 TLR3O15455 904 aaKnown RBP15.07■□□□□ 0
CLK3-209ENST00000562670 C4BPAP04003 597 aaKnown RBP15.07■□□□□ 0
CLK3-209ENST00000562670 CXCL8P10145 99 aa15.07■□□□□ 0
CLK3-209ENST00000562670 UCHL3P15374 230 aa15.07■□□□□ 0
CLK3-209ENST00000562670 TNNI1P19237 187 aa15.07■□□□□ 0
CLK3-209ENST00000562670 SLC9A1P19634 815 aa15.07■□□□□ 0
CLK3-209ENST00000562670 WNT7BP56706 349 aa15.07■□□□□ 0
CLK3-209ENST00000562670 CDK17Q00537 523 aa15.07■□□□□ 0
CLK3-209ENST00000562670 UBXN11Q5T124 520 aa15.07■□□□□ 0
CLK3-209ENST00000562670 CDR2LQ86X02 465 aaPredicted RBP15.07■□□□□ 0
CLK3-209ENST00000562670 TMEM139Q8IV31 216 aa15.07■□□□□ 0
CLK3-209ENST00000562670 THNSL1Q8IYQ7 743 aa15.07■□□□□ 0
CLK3-209ENST00000562670 EHBP1Q8NDI1 1231 aa15.07■□□□□ 0
CLK3-209ENST00000562670 ACAP3Q96P50 834 aa15.07■□□□□ 0
CLK3-209ENST00000562670 TOPORSQ9NS56 1045 aaPredicted RBP15.07■□□□□ 0
CLK3-209ENST00000562670 ST3GAL5Q9UNP4 418 aa15.07■□□□□ 0
CLK3-209ENST00000562670 PLAGL2Q9UPG8 496 aa15.07■□□□□ 0
CLK3-209ENST00000562670 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.07■□□□□ 0
CLK3-209ENST00000562670 PTPRJQ12913 1337 aa15.07■□□□□ 0
CLK3-209ENST00000562670 PARNO95453 639 aaKnown RBP15.06■□□□□ 0
CLK3-209ENST00000562670 NPTXRO95502 500 aa15.06■□□□□ 0
CLK3-209ENST00000562670 TFRCP02786 760 aaKnown RBP15.06■□□□□ 0
CLK3-209ENST00000562670 RAB27AP51159 221 aa15.06■□□□□ 0
CLK3-209ENST00000562670 ADKP55263 362 aaKnown RBP15.06■□□□□ 0
CLK3-209ENST00000562670 PAK2Q13177 524 aa15.06■□□□□ 0
CLK3-209ENST00000562670 LPIN1Q14693 890 aa15.06■□□□□ 0
CLK3-209ENST00000562670 DUOXA2Q1HG44 320 aa15.06■□□□□ 0
CLK3-209ENST00000562670 ZNF618Q5T7W0 954 aa15.06■□□□□ 0
CLK3-209ENST00000562670 TDRD10Q5VZ19 366 aaKnown RBP15.06■□□□□ 0
CLK3-209ENST00000562670 PDXDC1Q6P996 788 aa15.06■□□□□ 0
CLK3-209ENST00000562670 CACNA2D4Q7Z3S7 1137 aa15.06■□□□□ 0
CLK3-209ENST00000562670 ZNF516Q92618 1163 aa15.06■□□□□ 0
CLK3-209ENST00000562670 FAXDC2Q96IV6 333 aa15.06■□□□□ 0
CLK3-209ENST00000562670 SNX27Q96L92 541 aa15.06■□□□□ 0
CLK3-209ENST00000562670 TRIM6Q9C030 488 aaPredicted RBP15.06■□□□□ 0
CLK3-209ENST00000562670 RAB20Q9NX57 234 aa15.06■□□□□ 0
CLK3-209ENST00000562670 BRCA2P51587 3418 aa15.05■□□□□ 0
CLK3-209ENST00000562670 RNF225M0QZC1 329 aaPredicted RBP15.05■□□□□ -0
CLK3-209ENST00000562670 MEFVO15553 781 aaPredicted RBP15.05■□□□□ -0
CLK3-209ENST00000562670 ARHGAP6O43182 974 aa15.05■□□□□ -0
CLK3-209ENST00000562670 SELPP16109 830 aa15.05■□□□□ -0
CLK3-209ENST00000562670 YARSP54577 528 aaKnown RBP15.05■□□□□ -0
CLK3-209ENST00000562670 JAM2P57087 298 aa15.05■□□□□ -0
CLK3-209ENST00000562670 POLR2FP61218 127 aaKnown RBP15.05■□□□□ -0
CLK3-209ENST00000562670 LRMPQ12912 555 aa15.05■□□□□ -0
CLK3-209ENST00000562670 DSC3Q14574 896 aa15.05■□□□□ -0
CLK3-209ENST00000562670 TSR1Q2NL82 804 aaKnown RBP15.05■□□□□ -0
CLK3-209ENST00000562670 SLC10A6Q3KNW5 377 aa15.05■□□□□ -0
CLK3-209ENST00000562670 SEZ6Q53EL9 994 aa15.05■□□□□ -0
CLK3-209ENST00000562670 XKR4Q5GH76 650 aa15.05■□□□□ -0
CLK3-209ENST00000562670 SLC39A5Q6ZMH5 540 aa15.05■□□□□ -0
CLK3-209ENST00000562670 ENOSF1Q7L5Y1 443 aa15.05■□□□□ -0
CLK3-209ENST00000562670 ZSCAN30Q86W11 494 aa15.05■□□□□ -0
CLK3-209ENST00000562670 EFCAB13Q8IY85 973 aa15.05■□□□□ -0
CLK3-209ENST00000562670 TMEM192Q8IY95 271 aa15.05■□□□□ -0
CLK3-209ENST00000562670 HACE1Q8IYU2 909 aa15.05■□□□□ -0
CLK3-209ENST00000562670 TAS1R2Q8TE23 839 aa15.05■□□□□ -0
CLK3-209ENST00000562670 ANKRD36BP1Q96IX9 119 aa15.05■□□□□ -0
CLK3-209ENST00000562670 POP1Q99575 1024 aaKnown RBP15.05■□□□□ -0
CLK3-209ENST00000562670 BAG1Q99933 345 aaPredicted RBP15.05■□□□□ -0
CLK3-209ENST00000562670 EIF2AQ9BY44 585 aaKnown RBP15.05■□□□□ -0
CLK3-209ENST00000562670 AGO3Q9H9G7 860 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms