RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 HMGN1P05114 100 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SYN1P17600 705 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 ATF6P18850 670 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 ALAS2P22557 587 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PKLRP30613 574 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PHBP35232 272 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PPARGP37231 505 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 VHLP40337 213 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 ECE1P42892 770 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 FXR1P51114 621 aaKnown RBP eCLIP5.25□□□□□ -1.57
TCF4-215ENST00000562638 ZNF135P52742 658 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 RAD23BP54727 409 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 EPHB4P54760 987 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 RPL26P61254 145 aaKnown RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 KRT85P78386 507 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 MAP3K10Q02779 954 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 KDSRQ06136 332 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 TRIM14Q14142 442 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 DSC3Q14574 896 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 LPIN1Q14693 890 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 KCNJ8Q15842 424 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 VPS72Q15906 364 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 TMEM266Q2M3C6 531 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 BRDTQ58F21 947 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 ZC3H12BQ5HYM0 836 aaKnown RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 CLVS2Q5SYC1 327 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 MAP3K21Q5TCX8 1036 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 HAUS3Q68CZ6 603 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 TRAPPC11Q7Z392 1133 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 NET1Q7Z628 596 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 RALYLQ86SE5 291 aaKnown RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 CDH26Q8IXH8 852 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 IFT20Q8IY31 132 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 MMGT1Q8N4V1 131 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PCYOX1LQ8NBM8 494 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.25□□□□□ -1.57
TCF4-215ENST00000562638 ENKURQ8TC29 256 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 CHPT1Q8WUD6 406 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SYMPKQ92797 1274 aaKnown RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 HSPBAP1Q96EW2 488 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 BIRC8Q96P09 236 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 ZNF317Q96PQ6 595 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 VPS35Q96QK1 796 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 NAPGQ99747 312 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 ESYT1Q9BSJ8 1104 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 BEGAINQ9BUH8 593 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 STK33Q9BYT3 514 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SCAND2PQ9GZW5 306 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 ASCC2Q9H1I8 757 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 KCNN2Q9H2S1 579 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 LIN7BQ9HAP6 207 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 USP29Q9HBJ7 922 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SH3GLB2Q9NR46 395 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 NMRK1Q9NWW6 199 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SELENONQ9NZV5 590 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 EMC3Q9P0I2 261 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 SAMD15Q9P1V8 674 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 CNTN3Q9P232 1028 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 KIF17Q9P2E2 1029 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 AP3M1Q9Y2T2 418 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 RABGAP1Q9Y3P9 1069 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 ANGPTL3Q9Y5C1 460 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 PCDHGA8Q9Y5G5 932 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 MAGI2Q86UL8 1455 aa5.25□□□□□ -1.57
TCF4-215ENST00000562638 MAGI1Q96QZ7 1491 aaPredicted RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 PCF11O94913 1555 aaKnown RBP5.25□□□□□ -1.57
TCF4-215ENST00000562638 DAPK1P53355 1430 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 RIMS2Q9UQ26 1411 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ABCC6O95255 1503 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 URB2Q14146 1524 aaKnown RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 TMEM131LA2VDJ0 1609 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 SUPT6HQ7KZ85 1726 aaKnown RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 C1orf232A0A0U1RR37 186 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ZSCAN5BA6NJL1 495 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ZNF233A6NK53 670 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 EIF4E1BA6NMX2 242 aaKnown RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 A8MUI8 341 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 CAPN14A8MX76 684 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 INO80B-WBP1J3KQ70 363 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 SHOXO15266 292 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 CLOCKO15516 846 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 GTPBP6O43824 516 aaPredicted RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 MAFO75444 373 aaPredicted RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 KRT13P13646 458 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 PRKCAP17252 672 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 RASA1P20936 1047 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 TCEA1P23193 301 aaKnown RBP5.24□□□□□ -1.57
TCF4-215ENST00000562638 STX2P32856 288 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ASMTP46597 345 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 TRAPPC10P48553 1259 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 HSPA13P48723 471 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ATP1A2P50993 1020 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 NEK4P51957 841 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 PEX3P56589 373 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 COPS2P61201 443 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 NAA20P61599 178 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 IFITM2Q01629 132 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 ENPEPQ07075 957 aa5.24□□□□□ -1.57
TCF4-215ENST00000562638 DHX9Q08211 1270 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms