RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 PRR23AA6NEV1 266 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 ANHXE9PGG2 379 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 SRFP11831 508 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 CCT6AP40227 531 aaKnown RBP18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 FXR2P51116 673 aaKnown RBP eCLIP18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 HTR4Q13639 388 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 PPP2R5AQ15172 486 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 GLRA4Q5JXX5 417 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 NT5DC1Q5TFE4 455 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 FRMD5Q7Z6J6 570 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 ST13P5Q8NFI4 369 aaPredicted RBP18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 NXPE3Q969Y0 559 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 RTP3Q9BQQ7 232 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 BHMT2Q9H2M3 363 aa18.4■□□□□ 0.54
VPS9D1-AS1-201ENST00000562298 EIF5BO60841 1220 aaKnown RBP18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TRAPPC10P48553 1259 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 RBM25P49756 843 aaKnown RBP18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 EFNA5P52803 228 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 NTHL1P78549 312 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DCAF4L1Q3SXM0 396 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 GRASPQ7Z6J2 395 aaPredicted RBP18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 GPR152Q8TDT2 470 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 IFT74Q96LB3 600 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PPP1R10Q96QC0 940 aaKnown RBP18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 LRWD1Q9UFC0 647 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CA14Q9ULX7 337 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 KIAA1024Q9UPX6 916 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 NUMBLQ9Y6R0 609 aa18.39■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 C8AP07357 584 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 FSHRP23945 695 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TOB1P50616 345 aaPredicted RBP18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CLCNKBP51801 687 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ELAVL2Q12926 359 aaKnown RBP18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ANGPT1Q15389 498 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 LIN9Q5TKA1 542 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ATF7IP2Q5U623 682 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CD300LGQ6UXG3 332 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 IGSF22Q8N9C0 903 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DTWD2Q8NBA8 298 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 KIFAP3Q92845 792 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 KIF2CQ99661 725 aa18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DDX19AQ9NUU7 478 aaKnown RBP18.38■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DMXL1Q9Y485 3027 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TMEM189-UBE2V1I3L0A0 370 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 HNRNPA1P09651 372 aaKnown RBP eCLIP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 FGFR3P22607 806 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PPM1LQ5SGD2 360 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ERICH6BQ5W0A0 696 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 RSPO2Q6UXX9 243 aaPredicted RBP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CEP120Q8N960 986 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 C3orf58Q8NDZ4 430 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 FGF14Q92915 247 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 RPP25Q9BUL9 199 aaKnown RBP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TBC1D17Q9HA65 648 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 GOLGA2P5Q9HBQ8 144 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 NOL7Q9UMY1 257 aaKnown RBP18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DOCK6Q96HP0 2047 aa18.37■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PP2D1A8MPX8 630 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 STK25O00506 426 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CCL16O15467 120 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 B3GAT3O94766 335 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 U2AF2P26368 475 aaKnown RBP eCLIP18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 HOXA9P31269 272 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PTGDRQ13258 359 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 RAB33AQ14088 237 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PDIA5Q14554 519 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 UPP1Q16831 310 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PDXDC1Q6P996 788 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PARM1Q6UWI2 310 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DAW1Q8N136 415 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 SLC7A14Q8TBB6 771 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 SNX29Q8TEQ0 813 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ZSCAN31Q96LW9 406 aaPredicted RBP18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 SLC2A4RGQ9NR83 387 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 MTRRQ9UBK8 725 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TNFSF13BQ9Y275 285 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PCDHB6Q9Y5E3 794 aa18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ZFP37Q9Y6Q3 630 aaPredicted RBP18.36■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 COL4A3Q01955 1670 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PHLPP2Q6ZVD8 1323 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 E9PMD0 336 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 K7ERI5 159 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TKTP29401 623 aaKnown RBP18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 OR1D2P34982 312 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 NPTX2P47972 431 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PEX3P56589 373 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 SOX4Q06945 474 aaPredicted RBP18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 IL17AQ16552 155 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 DCLRE1AQ6PJP8 1040 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 TAS1R3Q7RTX0 852 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 FGF13Q92913 245 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 NKD2Q969F2 451 aaPredicted RBP18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 ACO2Q99798 780 aaKnown RBP18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 CDT1Q9H211 546 aa18.35■□□□□ 0.53
VPS9D1-AS1-201ENST00000562298 PTPRHQ9HD43 1115 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms