RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 MRPL4Q9BYD3 311 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 ELAC1Q9H777 363 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 LRFN2Q9ULH4 789 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 ZNF623O75123 536 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 FXR1P51114 621 aaKnown RBP eCLIP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 SLC39A4Q6P5W5 647 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 FAM43BQ6ZT52 329 aaPredicted RBP24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 YME1L1Q96TA2 773 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 DMAC2Q9NW81 257 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 TAB2Q9NYJ8 693 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 HCSTQ9UBK5 93 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 TNFSF13BQ9Y275 285 aa24.44■■□□□ 1.5
SYNGR3-202ENST00000562045 N4BP3O15049 544 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 STAG3L1P0CL83 205 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 PROZP22891 400 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 AFF1P51825 1210 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 PAN2Q504Q3 1202 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 ARMCX5Q6P1M9 558 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 AGMOQ6ZNB7 445 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 MRPL10Q7Z7H8 261 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 CCDC51Q96ER9 411 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 MKNK1Q9BUB5 465 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 INSL6Q9Y581 213 aa24.43■■□□□ 1.5
SYNGR3-202ENST00000562045 PIGRP01833 764 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 EPB41P11171 864 aaKnown RBP24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 PRKCSHP14314 528 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 LIG4P49917 911 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 NR1I3Q14994 352 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 CEP135Q66GS9 1140 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 ZBTB33Q86T24 672 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 DRC7Q8IY82 874 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 CEP120Q8N960 986 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 HELQQ8TDG4 1101 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 APOL6Q9BWW8 343 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 CDT1Q9H211 546 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 CXCL16Q9H2A7 254 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 RTN4Q9NQC3 1192 aaKnown RBP24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 FRMD4BQ9Y2L6 1034 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 NLRC5Q86WI3 1866 aa24.42■■□□□ 1.5
SYNGR3-202ENST00000562045 ANKRD63C9JTQ0 380 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 AKAP3O75969 853 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 EOMESO95936 686 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 PSMC2P35998 433 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 RAB27AP51159 221 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 CYP2J2P51589 502 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 FRMD5Q7Z6J6 570 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 SP7Q8TDD2 431 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 TIFAQ96CG3 184 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 CASD1Q96PB1 797 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 VPS16Q9H269 839 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 METTL14Q9HCE5 456 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 MSRAQ9UJ68 235 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 TRIP11Q15643 1979 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 EXOC3O60645 756 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 AKAP5P24588 427 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 MAN2A1Q16706 1144 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 TMEM192Q8IY95 271 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 CBWD1Q9BRT8 395 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 TRIM6Q9C030 488 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 INTS13Q9NVM9 706 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 ANKFY1Q9P2R3 1169 aa24.41■■□□□ 1.5
SYNGR3-202ENST00000562045 LINC01553A4QN01 128 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 TBKBP1A7MCY6 615 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 LINC00271P0C7V0 271 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 RAB30Q15771 203 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 ZNF568Q3ZCX4 644 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 ZPBP2Q6X784 338 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 TTYH1Q9H313 450 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 HSPBP1Q9NZL4 362 aa24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 ARMCX3Q9UH62 379 aaPredicted RBP24.4■■□□□ 1.5
SYNGR3-202ENST00000562045 LGALS16A8MUM7 142 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 HARSP12081 509 aaKnown RBP24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 SKIP12755 728 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 GARTP22102 1010 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 ADSSP30520 456 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 CASP4P49662 377 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 SEZ6Q53EL9 994 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 MPZL3Q6UWV2 235 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 XXYLT1Q8NBI6 393 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 POMGNT1Q8WZA1 660 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 SNTG2Q9NY99 539 aa24.39■■□□□ 1.5
SYNGR3-202ENST00000562045 PES1O00541 588 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 OFD1O75665 1012 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 TOM1L1O75674 476 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 ITGA4P13612 1032 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 TAP1Q03518 808 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 SLFN12LQ6IEE8 588 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 TRIM59Q8IWR1 403 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 FAM186BQ8IYM0 893 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 ZFP42Q96MM3 310 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 ADPGKQ9BRR6 497 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 PCIF1Q9H4Z3 704 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 CERS4Q9HA82 394 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 MRPL42Q9Y6G3 142 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 STYXL1Q9Y6J8 313 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 KIAA0391O15091 583 aaKnown RBP24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 OSTNP61366 133 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 PPP2R3AQ06190 1150 aa24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 BTG3Q14201 252 aaPredicted RBP24.38■■□□□ 1.49
SYNGR3-202ENST00000562045 MIIPQ5JXC2 388 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms