RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 TBX20Q9UMR3 447 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 NENFQ9UMX5 172 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 USP20Q9Y2K6 914 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 RBM47A0AV96 593 aaKnown RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 ADAMTS4O75173 837 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 BEX3Q00994 111 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 CCDC62Q6P9F0 684 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 GJB7Q6PEY0 223 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 CCNI2Q6ZMN8 369 aaPredicted RBP12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SLC30A5Q8TAD4 765 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 PBKQ96KB5 322 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 KMT5AQ9NQR1 393 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 SH3BP1Q9Y3L3 701 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 EMSYQ7Z589 1322 aa12.54□□□□□ -0.4
PCAT1-202ENST00000561978 DDX3XO00571 662 aaKnown RBP eCLIP12.53□□□□□ -0.4
PCAT1-202ENST00000561978 NCK2O43639 380 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 TNFAIP3P21580 790 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 CXCR5P32302 372 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 NPTX2P47972 431 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 DMTNQ08495 405 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 C2orf54Q08AI8 447 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 CASP8Q14790 479 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 RPS6KA1Q15418 735 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 TERF2Q15554 542 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 PLA2G4FQ68DD2 849 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 SWSAP1Q6NVH7 229 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 MAP4K3Q8IVH8 894 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 TMEM161BQ8NDZ6 487 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 IFT74Q96LB3 600 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 SELENOOQ9BVL4 669 aa12.53□□□□□ -0.4
PCAT1-202ENST00000561978 AJAP1Q9UKB5 411 aaPredicted RBP12.53□□□□□ -0.4
PCAT1-202ENST00000561978 UBA1P22314 1058 aaKnown RBP12.52□□□□□ -0.4
PCAT1-202ENST00000561978 ICAM3P32942 547 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 XKR3Q5GH77 459 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 GNASQ5JWF2 1037 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 ABHD15Q6UXT9 468 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 LMO3Q8TAP4 145 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 PAWRQ96IZ0 340 aaKnown RBP12.52□□□□□ -0.4
PCAT1-202ENST00000561978 YY1AP1Q9H869 796 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.4
PCAT1-202ENST00000561978 DENND3A2RUS2 1198 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 FTCDO95954 541 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM253P0C7T8 217 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 GTF2H1P32780 548 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 ACTR2P61160 394 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 RNF180Q86T96 592 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 TPCN2Q8NHX9 752 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 SH2D3AQ9BRG2 576 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 GPR88Q9GZN0 384 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 ATP6V0A4Q9HBG4 840 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 UBE2TQ9NPD8 197 aaPredicted RBP12.52□□□□□ -0.41
PCAT1-202ENST00000561978 PDLIM7Q9NR12 457 aa12.52□□□□□ -0.41
PCAT1-202ENST00000561978 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 STBD1O95210 358 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 GGPS1O95749 300 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 OAS2P29728 719 aaKnown RBP12.51□□□□□ -0.41
PCAT1-202ENST00000561978 MXI1P50539 228 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 GJA9P57773 515 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 DLG4P78352 724 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 SP4Q02446 784 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 KCNA10Q16322 511 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 SNRNP35Q16560 246 aaKnown RBP12.51□□□□□ -0.41
PCAT1-202ENST00000561978 ARHGAP44Q17R89 818 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 EPC2Q52LR7 807 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 BRDTQ58F21 947 aaPredicted RBP12.51□□□□□ -0.41
PCAT1-202ENST00000561978 HSP90B2PQ58FF3 399 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
PCAT1-202ENST00000561978 SLFN11Q7Z7L1 901 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 ARRDC4Q8NCT1 418 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 TMC2Q8TDI7 906 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 CTNNBL1Q8WYA6 563 aaPredicted RBP12.51□□□□□ -0.41
PCAT1-202ENST00000561978 PSMB7Q99436 277 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 LRRC1Q9BTT6 524 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 SPC25Q9HBM1 224 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 CYP26B1Q9NR63 512 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 IGSF9BQ9UPX0 1349 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 TELO2Q9Y4R8 837 aa12.51□□□□□ -0.41
PCAT1-202ENST00000561978 FOXN3O00409 490 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 DNM1LO00429 736 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ZNF862O60290 1169 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 FARP2O94887 1054 aaPredicted RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KIF4AO95239 1232 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 SUPT20HL2P0C7V6 817 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 TGFB3P10600 412 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 GARTP22102 1010 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 GCLMP48507 274 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 GALCP54803 685 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 FSCN1Q16658 493 aaKnown RBP12.5□□□□□ -0.41
PCAT1-202ENST00000561978 HSDL1Q3SXM5 330 aa12.5□□□□□ -0.41
PCAT1-202ENST00000561978 KRT39Q6A163 491 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms