RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 NOTCH4Q99466 2003 aa16.05■□□□□ 0.16
SPG7-205ENST00000561945 TRIP11Q15643 1979 aa16.05■□□□□ 0.16
SPG7-205ENST00000561945 DOCK6Q96HP0 2047 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 CASTOR2A6NHX0 329 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 CFHP08603 1231 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 RAB33AQ14088 237 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 PDIA5Q14554 519 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 ECM1Q16610 540 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 DCAF4L1Q3SXM0 396 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 XKR4Q5GH76 650 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 EEF1DP3Q658K8 133 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 CD300LGQ6UXG3 332 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.04■□□□□ 0.16
SPG7-205ENST00000561945 IGSF22Q8N9C0 903 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 NKD2Q969F2 451 aaPredicted RBP16.04■□□□□ 0.16
SPG7-205ENST00000561945 PPP1R10Q96QC0 940 aaKnown RBP16.04■□□□□ 0.16
SPG7-205ENST00000561945 ADPGKQ9BRR6 497 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 PIDD1Q9HB75 910 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 PPP4R2Q9NY27 417 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 DLGAP2Q9P1A6 1054 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 FANCMQ8IYD8 2048 aa16.04■□□□□ 0.16
SPG7-205ENST00000561945 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 NEFLP07196 543 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 ANGPT1Q15389 498 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 ZNF174Q15697 407 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 PSMD5Q16401 504 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 TTC38Q5R3I4 469 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 FRMD5Q7Z6J6 570 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 NOSTRINQ8IVI9 506 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 GPR152Q8TDT2 470 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 KIFAP3Q92845 792 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 C8orf76Q96K31 380 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 UROC1Q96N76 676 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 PTPRHQ9HD43 1115 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 MTRRQ9UBK8 725 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 ZNF292O60281 2723 aa16.03■□□□□ 0.16
SPG7-205ENST00000561945 SEC24BO95487 1268 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 MYBP10242 640 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 FSHRP23945 695 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 U2AF2P26368 475 aaKnown RBP eCLIP16.02■□□□□ 0.164e-11■□□□□ 11.3
SPG7-205ENST00000561945 FOSBP53539 338 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 GUCY1B3Q02153 619 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 UPP1Q16831 310 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 DCLRE1AQ6PJP8 1040 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 ALKAL1Q6UXT8 129 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 GET4Q7L5D6 327 aaPredicted RBP16.02■□□□□ 0.16
SPG7-205ENST00000561945 GLYCTKQ8IVS8 523 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 DEPTORQ8TB45 409 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 HASPINQ8TF76 798 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 SNX27Q96L92 541 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 CDH7Q9ULB5 785 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 TNFSF13BQ9Y275 285 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 BACE2Q9Y5Z0 518 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
SPG7-205ENST00000561945 EP300Q09472 2414 aaPredicted RBP16.02■□□□□ 0.15
SPG7-205ENST00000561945 PDCD11Q14690 1871 aaKnown RBP16.01■□□□□ 0.15
SPG7-205ENST00000561945 ADAM12O43184 909 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 C8AP07357 584 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 STARD6P59095 220 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 HMGN5P82970 282 aaKnown RBP16.01■□□□□ 0.15
SPG7-205ENST00000561945 ATF7IP2Q5U623 682 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 GRASPQ7Z6J2 395 aaPredicted RBP16.01■□□□□ 0.15
SPG7-205ENST00000561945 FGF14Q92915 247 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 DDX23Q9BUQ8 820 aaKnown RBP16.01■□□□□ 0.15
SPG7-205ENST00000561945 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 SEMA4AQ9H3S1 761 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 TMEM134Q9H6X4 195 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 TBC1D17Q9HA65 648 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 AVENQ9NQS1 362 aaPredicted RBP16.01■□□□□ 0.15
SPG7-205ENST00000561945 ARHGEF3Q9NR81 526 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 LRWD1Q9UFC0 647 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 USP20Q9Y2K6 914 aa16.01■□□□□ 0.15
SPG7-205ENST00000561945 PHLPP2Q6ZVD8 1323 aa16■□□□□ 0.15
SPG7-205ENST00000561945 PROZP22891 400 aa16■□□□□ 0.15
SPG7-205ENST00000561945 IGFBP6P24592 240 aaPredicted RBP16■□□□□ 0.15
SPG7-205ENST00000561945 GRM5P41594 1212 aa16■□□□□ 0.15
SPG7-205ENST00000561945 CLCNKBP51801 687 aa16■□□□□ 0.15
SPG7-205ENST00000561945 PPM1LQ5SGD2 360 aa16■□□□□ 0.15
SPG7-205ENST00000561945 LIN9Q5TKA1 542 aa16■□□□□ 0.15
SPG7-205ENST00000561945 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
SPG7-205ENST00000561945 CEP57Q86XR8 500 aa16■□□□□ 0.15
SPG7-205ENST00000561945 CCDC83Q8IWF9 413 aa16■□□□□ 0.15
SPG7-205ENST00000561945 DAW1Q8N136 415 aa16■□□□□ 0.15
SPG7-205ENST00000561945 FGF13Q92913 245 aa16■□□□□ 0.15
SPG7-205ENST00000561945 IFT74Q96LB3 600 aa16■□□□□ 0.15
SPG7-205ENST00000561945 ZSCAN31Q96LW9 406 aaPredicted RBP16■□□□□ 0.15
SPG7-205ENST00000561945 KIFC3Q9BVG8 833 aa16■□□□□ 0.15
SPG7-205ENST00000561945 ARHGAP28Q9P2N2 729 aa16■□□□□ 0.15
SPG7-205ENST00000561945 KCNH3Q9ULD8 1083 aa16■□□□□ 0.15
SPG7-205ENST00000561945 CA14Q9ULX7 337 aa16■□□□□ 0.15
SPG7-205ENST00000561945 KIAA1024Q9UPX6 916 aa16■□□□□ 0.15
SPG7-205ENST00000561945 PATJQ8NI35 1801 aa16■□□□□ 0.15
SPG7-205ENST00000561945 MIA3Q5JRA6 1907 aa16■□□□□ 0.15
SPG7-205ENST00000561945 SMIM28A0A1B0GU29 152 aa15.99■□□□□ 0.15
SPG7-205ENST00000561945 K7ERI5 159 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms