RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 MSL2Q9HCI7 577 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 MYRFQ9Y2G1 1151 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 TESMINQ9Y4I5 508 aa8.01□□□□□ -1.13
SMG1-204ENST00000561940 C1QTNF3-AMACRE9PGA6 284 aa8□□□□□ -1.13
SMG1-204ENST00000561940 AMHP03971 560 aa8□□□□□ -1.13
SMG1-204ENST00000561940 LTA4HP09960 611 aaKnown RBP8□□□□□ -1.13
SMG1-204ENST00000561940 TRIM27P14373 513 aa8□□□□□ -1.13
SMG1-204ENST00000561940 SLC6A9P48067 706 aa8□□□□□ -1.13
SMG1-204ENST00000561940 DSC2Q02487 901 aa8□□□□□ -1.13
SMG1-204ENST00000561940 COL23A1Q86Y22 540 aaPredicted RBP8□□□□□ -1.13
SMG1-204ENST00000561940 DENND1CQ8IV53 801 aa8□□□□□ -1.13
SMG1-204ENST00000561940 PMM1Q92871 262 aa8□□□□□ -1.13
SMG1-204ENST00000561940 HDAC10Q969S8 669 aa8□□□□□ -1.13
SMG1-204ENST00000561940 C1GALT1C1Q96EU7 318 aa8□□□□□ -1.13
SMG1-204ENST00000561940 ZNF512Q96ME7 567 aaPredicted RBP8□□□□□ -1.13
SMG1-204ENST00000561940 FAM193BQ96PV7 902 aaPredicted RBP8□□□□□ -1.13
SMG1-204ENST00000561940 LRFN3Q9BTN0 628 aa8□□□□□ -1.13
SMG1-204ENST00000561940 SIK3Q9Y2K2 1263 aa8□□□□□ -1.13
SMG1-204ENST00000561940 PCDHB1Q9Y5F3 818 aa8□□□□□ -1.13
SMG1-204ENST00000561940 LRRC14BA6NHZ5 514 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 APAF1O14727 1248 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 TPP1O14773 563 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 MATN3O15232 486 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 PLIN1O60240 522 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 UBXN7O94888 489 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 PURAQ00577 322 aaKnown RBP7.99□□□□□ -1.13
SMG1-204ENST00000561940 CHST15Q7LFX5 561 aaPredicted RBP7.99□□□□□ -1.13
SMG1-204ENST00000561940 RHOT1Q8IXI2 618 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 MB21D1Q8N884 522 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 SNX33Q8WV41 574 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 SLC39A13Q96H72 371 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 MPHOSPH9Q99550 1183 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 CGRRF1Q99675 332 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 CHMP4AQ9BY43 222 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
SMG1-204ENST00000561940 H3BML4 177 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 ADCY6O43306 1168 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 MTSS1O43312 755 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 B3GALT2O43825 422 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 TUSC2O75896 110 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 MEF2AQ02078 507 aaPredicted RBP7.98□□□□□ -1.13
SMG1-204ENST00000561940 DUSP2Q05923 314 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 MST1LQ2TV78 715 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 COBLL1Q53SF7 1204 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 IL31Q6EBC2 164 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 C1orf210Q8IVY1 113 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 GSPT2Q8IYD1 628 aaKnown RBP7.98□□□□□ -1.13
SMG1-204ENST00000561940 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.98□□□□□ -1.13
SMG1-204ENST00000561940 PGBD4Q96DM1 585 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 BORCS6Q96GS4 357 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 C7orf25Q9BPX7 421 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 B3GNT5Q9BYG0 378 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 MAN1C1Q9NR34 630 aa7.98□□□□□ -1.13
SMG1-204ENST00000561940 RHCEP18577 417 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 NEK3P51956 506 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 MAP2K6P52564 334 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 DGCR2P98153 550 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 RHDQ02161 417 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 CRHR2Q13324 411 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 LCE5AQ5TCM9 118 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 Q6ZRM9 215 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 LILRA3Q8N6C8 439 aaPredicted RBP7.97□□□□□ -1.13
SMG1-204ENST00000561940 FAM156AQ8NDB6 213 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 FBXO18Q8NFZ0 1043 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 PJA1Q8NG27 643 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 PDCD2LQ9BRP1 358 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 LDAHQ9H6V9 325 aa7.97□□□□□ -1.13
SMG1-204ENST00000561940 DDX21Q9NR30 783 aaKnown RBP eCLIP7.97□□□□□ -1.13
SMG1-204ENST00000561940 FAM171A2A8MVW0 826 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 WNT10BO00744 389 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 HOXA3O43365 443 aaPredicted RBP7.96□□□□□ -1.14
SMG1-204ENST00000561940 TNFRSF1AP19438 455 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 HTR1BP28222 390 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 ECHS1P30084 290 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 SCNN1GP51170 649 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 TARDBPQ13148 414 aaKnown RBP eCLIP7.96□□□□□ -1.14
SMG1-204ENST00000561940 ANKRD35Q8N283 1001 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 IL17DQ8TAD2 202 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 RGMAQ96B86 450 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 MIEF2Q96C03 454 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 PAWRQ96IZ0 340 aaKnown RBP7.96□□□□□ -1.14
SMG1-204ENST00000561940 NR2E3Q9Y5X4 410 aa7.96□□□□□ -1.14
SMG1-204ENST00000561940 CFAP20Q9Y6A4 193 aaKnown RBP7.96□□□□□ -1.14
SMG1-204ENST00000561940 NRP1O14786 923 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 FTLP02792 175 aaPredicted RBP7.95□□□□□ -1.14
SMG1-204ENST00000561940 HK1P19367 917 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 RRP1BQ14684 758 aaKnown RBP7.95□□□□□ -1.14
SMG1-204ENST00000561940 SWSAP1Q6NVH7 229 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 NPNTQ6UXI9 565 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 RNF207Q6ZRF8 634 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 CCDC149Q6ZUS6 474 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 XYLT1Q86Y38 959 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 REPS2Q8NFH8 660 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 PLBD2Q8NHP8 589 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 NSUN6Q8TEA1 469 aaKnown RBP7.95□□□□□ -1.14
SMG1-204ENST00000561940 ZNF480Q8WV37 535 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 ATXN2LQ8WWM7 1075 aaKnown RBP7.95□□□□□ -1.14
SMG1-204ENST00000561940 DMRTA2Q96SC8 542 aa7.95□□□□□ -1.14
SMG1-204ENST00000561940 MPHOSPH6Q99547 160 aaKnown RBP7.95□□□□□ -1.14
SMG1-204ENST00000561940 ENKD1Q9H0I2 346 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms