RNA–Protein interactions for RNA: ENST00000561707.1

COTL1-202, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 1 (best)

Gene COTL1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-202ENST00000561707 USP38Q8NB14 1042 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 OR5B17Q8NGF7 314 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 TRIM43Q96BQ3 446 aaPredicted RBP13.92□□□□□ -0.18
COTL1-202ENST00000561707 CCDC51Q96ER9 411 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 PCMTD1Q96MG8 357 aaPredicted RBP13.92□□□□□ -0.18
COTL1-202ENST00000561707 FNBP1Q96RU3 617 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 ADAM2Q99965 735 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 TMEM117Q9H0C3 514 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 WNT8AQ9H1J5 351 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 NXF3Q9H4D5 531 aaKnown RBP13.92□□□□□ -0.18
COTL1-202ENST00000561707 KLK14Q9P0G3 267 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 SIK3Q9Y2K2 1263 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 PCDHB2Q9Y5E7 798 aa13.92□□□□□ -0.18
COTL1-202ENST00000561707 MEIS3P2A8K0S8 358 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 RNF225M0QZC1 329 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 PITPNM1O00562 1244 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 C4BPAP04003 597 aaKnown RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 CLTBP09497 229 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 ACTN1P12814 892 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 ZSCAN20P17040 1043 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 TNNI1P19237 187 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 CLDN10P78369 228 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 CCDC173Q0VFZ6 552 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 HSP90AA2PQ14568 343 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 COL13A1Q5TAT6 717 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 DPY19L2P1Q6NXN4 242 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 SV2AQ7L0J3 742 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 DBF4BQ8NFT6 615 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 CPLX3Q8WVH0 158 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 SEMA4DQ92854 862 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 LPPQ93052 612 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 ELMO3Q96BJ8 720 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 ERGIC2Q96RQ1 377 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 CGRRF1Q99675 332 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 CCDC94Q9BW85 323 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 LSM14BQ9BX40 385 aaKnown RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 TRIM6Q9C030 488 aaPredicted RBP13.91□□□□□ -0.18
COTL1-202ENST00000561707 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.91□□□□□ -0.187e-11■■■■■ 260.8
COTL1-202ENST00000561707 PARP2Q9UGN5 583 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 IPPQ9Y573 584 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 ALPK3Q96L96 1907 aa13.91□□□□□ -0.18
COTL1-202ENST00000561707 A0A1W2PQC6 194 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 TTC26A0AVF1 554 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 EPHB6O15197 1021 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 RECQL4O94761 1208 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 IL18RAPO95256 599 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 ITGB8P26012 769 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 PON1P27169 355 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 MYL7Q01449 175 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 ENPEPQ07075 957 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 TBX2Q13207 712 aaPredicted RBP13.9□□□□□ -0.18
COTL1-202ENST00000561707 ARID5BQ14865 1188 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 SURF1Q15526 300 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 KYAT1Q16773 422 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 JADE1Q6IE81 842 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 GBP6Q6ZN66 633 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 DEFB128Q7Z7B8 93 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 MRPL10Q7Z7H8 261 aaKnown RBP13.9□□□□□ -0.18
COTL1-202ENST00000561707 EFCAB13Q8IY85 973 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 EHBP1Q8NDI1 1231 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 LINC01599Q8WXQ3 324 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
COTL1-202ENST00000561707 PRDM5Q9NQX1 630 aaPredicted RBP13.9□□□□□ -0.18
COTL1-202ENST00000561707 FAM105AQ9NUU6 356 aa13.9□□□□□ -0.18
COTL1-202ENST00000561707 ENPP3O14638 875 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 STX10O60499 249 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 NOL4O94818 638 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 VNN1O95497 513 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 NFICP08651 508 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 GTF2H1P32780 548 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 GUCY2FP51841 1108 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 TFAMQ00059 246 aaKnown RBP13.89□□□□□ -0.19
COTL1-202ENST00000561707 EXOC3L4Q17RC7 722 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 PLEKHG4Q58EX7 1191 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 TDRD10Q5VZ19 366 aaKnown RBP13.89□□□□□ -0.19
COTL1-202ENST00000561707 SPECC1LQ69YQ0 1117 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 ALKAL1Q6UXT8 129 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 C15orf39Q6ZRI6 1047 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 LMO3Q8TAP4 145 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 SEPT8Q92599 483 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 ZMAT2Q96NC0 199 aaKnown RBP13.89□□□□□ -0.19
COTL1-202ENST00000561707 INTS2Q9H0H0 1204 aaKnown RBP13.89□□□□□ -0.19
COTL1-202ENST00000561707 TMEM8AQ9HCN3 771 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 SIX2Q9NPC8 291 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 MIOSQ9NXC5 875 aa13.89□□□□□ -0.19
COTL1-202ENST00000561707 PDCD11Q14690 1871 aaKnown RBP13.89□□□□□ -0.19
COTL1-202ENST00000561707 KIAA0355O15063 1070 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 PMM2O15305 246 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 TIMP1P01033 207 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 CST3P01034 146 aaPredicted RBP13.88□□□□□ -0.19
COTL1-202ENST00000561707 ITGA4P13612 1032 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 MXI1P50539 228 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 FAM189BP81408 668 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 POU5F1Q01860 360 aaKnown RBP13.88□□□□□ -0.19
COTL1-202ENST00000561707 LRMPQ12912 555 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 DUOXA2Q1HG44 320 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 ZACNQ401N2 412 aa13.88□□□□□ -0.19
COTL1-202ENST00000561707 EPC2Q52LR7 807 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms