RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 ZNF609O15014 1411 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 USP6P35125 1406 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 HEG1Q9ULI3 1381 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 TYW5A2RUC4 315 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 M0QYV0 167 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 BNIP3LO60238 219 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 RTN2O75298 545 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 IL10P22301 178 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 GRIN1Q05586 938 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 DNAJC3Q13217 504 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 LMBRD2Q68DH5 695 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 FRMD5Q7Z6J6 570 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 GFM2Q969S9 779 aaKnown RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CNBD2Q96M20 576 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 SENP1Q9P0U3 644 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 CHORDC1Q9UHD1 332 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 HAO1Q9UJM8 370 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 NEU2Q9Y3R4 380 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 DUSP10Q9Y6W6 482 aa10.78□□□□□ -0.68
GTF3C1-202ENST00000561623 HNRNPCL2B2RXH8 293 aa10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 AIM2O14862 343 aa10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 ATMINO43313 823 aaPredicted RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 NMT1P30419 496 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 EZH2Q15910 746 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 HEATR6Q6AI08 1181 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 ADCK1Q86TW2 530 aa10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 PRPF39Q86UA1 669 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 CPSF3Q9UKF6 684 aaKnown RBP10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 MBD5Q9P267 1494 aa10.77□□□□□ -0.68
GTF3C1-202ENST00000561623 DENND3A2RUS2 1198 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 GTPBP10A4D1E9 387 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SNX2O60749 519 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT4P19013 534 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 OVGP1Q12889 678 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 AP3B2Q13367 1082 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 NAB2Q15742 525 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 FRA10AC1Q70Z53 315 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 MIGA2Q7L4E1 593 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SGMS1Q86VZ5 419 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 FSD1LQ9BXM9 530 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 PCMTD2Q9NV79 361 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 PSMC3IPQ9P2W1 217 aaPredicted RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CHMP2BQ9UQN3 213 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 A0A0G2JLW4 131 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 TNPO2O14787 897 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 DGKIO75912 1065 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CTDNEP1O95476 244 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SERPINB2P05120 415 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 HLA-DPA1P20036 260 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 KLRC1P26715 233 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 EPS8L3Q8TE67 593 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CPA5Q8WXQ8 436 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CCT7Q99832 543 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 EDEM3Q9BZQ6 932 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 RFX7Q2KHR2 1363 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SSU72P8A0A1W2PR75 194 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 GNAT1P11488 350 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 PAPOLAP51003 745 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 RPS6P62753 249 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SLFN12LQ6IEE8 588 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 TRAPPC11Q7Z392 1133 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 NAF1Q96HR8 494 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 L1RE1Q9UN81 338 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 WDR17Q8IZU2 1322 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 XPOTO43592 962 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 ITIH2P19823 946 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 BCAR1P56945 870 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 HUNKP57058 714 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 EIF3EP60228 445 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 SKOR1P84550 965 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 STX3Q13277 289 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 ARL13BQ3SXY8 428 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CEP95Q96GE4 821 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 COG4Q9H9E3 785 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 TMEM51Q9NW97 253 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 LCMT1Q9UIC8 334 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 TMEM2Q9UHN6 1383 aa10.77□□□□□ -0.69
GTF3C1-202ENST00000561623 CELF2O95319 508 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 FDPSP14324 419 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 UCHL3P15374 230 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 ITGA8P53708 1063 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 UBE3AQ05086 875 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 KRT33BQ14525 404 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 TTC8Q8TAM2 541 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 DDX56Q9NY93 547 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 ITM2BQ9Y287 266 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 MED14O60244 1454 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PAX7P23759 505 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 CACNB3P54284 484 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 NUP93Q8N1F7 819 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 ENGASEQ8NFI3 743 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SCG3Q8WXD2 468 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 SHCBP1LQ9BZQ2 653 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 ANKZF1Q9H8Y5 726 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 PIK3R2O00459 728 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 NSL1Q96IY1 281 aa10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 GCOM2Q9BZD3 368 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-202ENST00000561623 TMEM117Q9H0C3 514 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms