RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 FAM212AQ96EL1 285 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 FBXL18Q96ME1 805 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 YME1L1Q96TA2 773 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TSG101Q99816 390 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TMEM117Q9H0C3 514 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 PLEKHA5Q9HAU0 1116 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 RC3H2Q9HBD1 1191 aaKnown RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 KIAA1586Q9HCI6 787 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 TOPORSQ9NS56 1045 aaPredicted RBP11.19□□□□□ -0.62
LRRC28-221ENST00000561276 KANSL3Q9P2N6 904 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 CTNND2Q9UQB3 1225 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 INPP5FQ9Y2H2 1132 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 COL4A6Q14031 1691 aa11.19□□□□□ -0.62
LRRC28-221ENST00000561276 PDE4DIPQ5VU43 2346 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 SMIM28A0A1B0GU29 152 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 TTC26A0AVF1 554 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 BICDL2A1A5D9 508 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 LACTBL1A8MY62 500 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 MEFVO15553 781 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 POMCP01189 267 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 ADRB2P07550 413 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 CXCL8P10145 99 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 NR2F2P24468 414 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 PBX2P40425 430 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 CASP4P49662 377 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 SCNN1GP51170 649 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 FKBP3Q00688 224 aaKnown RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 POU5F1Q01860 360 aaKnown RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 PAK1Q13153 545 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 BTG3Q14201 252 aaPredicted RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 SNRNP35Q16560 246 aaKnown RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 ZSCAN23Q3MJ62 389 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 XKR4Q5GH76 650 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 CEP135Q66GS9 1140 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 LRRC55Q6ZSA7 311 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 CBWD2Q8IUF1 395 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 URGCPQ8TCY9 931 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 EEF2KMTQ96G04 330 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 MED15Q96RN5 788 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 DUSP9Q99956 384 aaKnown RBP11.18□□□□□ -0.62
LRRC28-221ENST00000561276 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 ANO10Q9NW15 660 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 RWDD2AQ9UIY3 292 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 FRMD4BQ9Y2L6 1034 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 PCDHA11Q9Y5I1 949 aa11.18□□□□□ -0.62
LRRC28-221ENST00000561276 LCHNA4D1U4 455 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 PTGESO14684 152 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CETN3O15182 167 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 INPPL1O15357 1258 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 DDHD2O94830 711 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 IL18RAPO95256 599 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 THP07101 528 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CCDC192P0DO97 292 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 ERCC5P28715 1186 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 RNASELQ05823 741 aaKnown RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 PPP2R3AQ06190 1150 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 TYRO3Q06418 890 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 SPAG1Q07617 926 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 HSP90AA2PQ14568 343 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 STX1AQ16623 288 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 LRIT3Q3SXY7 679 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CT47A1Q5JQC4 288 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 TTI2Q6NXR4 508 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 FOXR2Q6PJQ5 311 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 ZNF280BQ86YH2 543 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CD302Q8IX05 232 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CMTR2Q8IYT2 770 aaKnown RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 FIBCD1Q8N539 461 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 RSPH1Q8WYR4 309 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 SNX27Q96L92 541 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 MFSD14AQ96MC6 490 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 ZMAT2Q96NC0 199 aaKnown RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 FAM193BQ96PV7 902 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 RPS6KC1Q96S38 1066 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 SRRTQ9BXP5 876 aaKnown RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 PBX4Q9BYU1 374 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 GZF1Q9H116 711 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 ASB7Q9H672 318 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CWH43Q9H720 699 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 RBAKQ9NYW8 714 aaPredicted RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 CNTN3Q9P232 1028 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 MSRAQ9UJ68 235 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 PLAGL2Q9UPG8 496 aa11.17□□□□□ -0.62
LRRC28-221ENST00000561276 YBX2Q9Y2T7 364 aaKnown RBP11.17□□□□□ -0.62
LRRC28-221ENST00000561276 AKAP3O75969 853 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 ALDH2P05091 517 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 CA3P07451 260 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 KCNE1P15382 129 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 PSMC2P35998 433 aaKnown RBP11.16□□□□□ -0.62
LRRC28-221ENST00000561276 WNT7BP56706 349 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 SMAD3P84022 425 aaKnown RBP11.16□□□□□ -0.62
LRRC28-221ENST00000561276 RAB30Q15771 203 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 ZBTB6Q15916 424 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 ANO6Q4KMQ2 910 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 GLRA4Q5JXX5 417 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 JADE1Q6IE81 842 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 C11orf57Q6ZUT1 292 aaPredicted RBP11.16□□□□□ -0.62
LRRC28-221ENST00000561276 FILIP1Q7Z7B0 1213 aa11.16□□□□□ -0.62
LRRC28-221ENST00000561276 CSGALNACT2Q8N6G5 542 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms