RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 B3GAT3O94766 335 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 KRT19P08727 400 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 TPM4P67936 248 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 CREMQ03060 361 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 MYO1EQ12965 1108 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 STK4Q13043 487 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 ADAM9Q13443 819 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 MYBPC2Q14324 1141 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 CCDC40Q4G0X9 1142 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 DCLRE1AQ6PJP8 1040 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 DSTYKQ6XUX3 929 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 ZNF598Q86UK7 904 aaKnown RBP11.63□□□□□ -0.55
TPM1-229ENST00000561242 METTL23Q86XA0 190 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 MLKLQ8NB16 471 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 COLGALT1Q8NBJ5 622 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 ANKRD20A12PQ8NF67 263 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 LRRC15Q8TF66 581 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 P2RX5Q93086 422 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 HPS3Q969F9 1004 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 SAAL1Q96ER3 474 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 LRCH3Q96II8 777 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 EMILIN2Q9BXX0 1053 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 IMPG2Q9BZV3 1241 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 PRDM12Q9H4Q4 367 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 NGRNQ9NPE2 291 aaKnown RBP11.63□□□□□ -0.55
TPM1-229ENST00000561242 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 HSPBP1Q9NZL4 362 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 DPP7Q9UHL4 492 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 DERAQ9Y315 318 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 ZMYM2Q9UBW7 1377 aa11.63□□□□□ -0.55
TPM1-229ENST00000561242 GOLGA8IPA6NC78 632 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 GOLGA8JA6NMD2 632 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 ANKRD63C9JTQ0 380 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 NCK2O43639 380 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 FGF18O76093 207 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 CSPG5O95196 566 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 URODP06132 367 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 DLATP10515 647 aaKnown RBP11.62□□□□□ -0.55
TPM1-229ENST00000561242 NR2F2P24468 414 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
TPM1-229ENST00000561242 GATMP50440 423 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 AP3M2P53677 418 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 FKBP3Q00688 224 aaKnown RBP11.62□□□□□ -0.55
TPM1-229ENST00000561242 DUOXA2Q1HG44 320 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 SEZ6Q53EL9 994 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 TIGD5Q53EQ6 642 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 CLLU1OSQ5K130 101 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 CEP57Q86XR8 500 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 KLHL23Q8NBE8 558 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 SP7Q8TDD2 431 aaPredicted RBP11.62□□□□□ -0.55
TPM1-229ENST00000561242 SCFD1Q8WVM8 642 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 PPM1EQ8WY54 764 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 KCNN1Q92952 543 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 ZFP42Q96MM3 310 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 C17orf80Q9BSJ5 609 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 RNF39Q9H2S5 420 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 MRPL17Q9NRX2 175 aaKnown RBP11.62□□□□□ -0.55
TPM1-229ENST00000561242 AGPAT3Q9NRZ7 376 aa11.62□□□□□ -0.55
TPM1-229ENST00000561242 SF3B1O75533 1304 aaKnown RBP eCLIP11.61□□□□□ -0.55
TPM1-229ENST00000561242 SMIM28A0A1B0GU29 152 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 LCHNA4D1U4 455 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CASTOR2A6NHX0 329 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 LACTBL1A8MY62 500 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 H3BNC9 293 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 NRP1O14786 923 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CXCL14O95715 111 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 GNA14O95837 355 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 NR3C1P04150 777 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CCDC192P0DO97 292 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CXCL8P10145 99 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 P4HA1P13674 534 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 PROZP22891 400 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 PNPLA4P41247 253 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CASP5P51878 434 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 LRRC63Q05C16 580 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 PAK1Q13153 545 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 MAPK8IP2Q13387 824 aaPredicted RBP11.61□□□□□ -0.55
TPM1-229ENST00000561242 BIRC3Q13489 604 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 SMC1AQ14683 1233 aaKnown RBP11.61□□□□□ -0.55
TPM1-229ENST00000561242 BMT2Q1RMZ1 405 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 GLRA4Q5JXX5 417 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 TAS1R3Q7RTX0 852 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 FAM114A1Q8IWE2 563 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 APPL2Q8NEU8 664 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 POF1BQ8WVV4 589 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
TPM1-229ENST00000561242 CCDC127Q96BQ5 260 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 VWCEQ96DN2 955 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 SNX27Q96L92 541 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 ZNF560Q96MR9 790 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 NRDE2Q9H7Z3 1164 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 METTL14Q9HCE5 456 aaKnown RBP11.61□□□□□ -0.55
TPM1-229ENST00000561242 PTPRHQ9HD43 1115 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 ANO10Q9NW15 660 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 LMCD1Q9NZU5 365 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 MAN1B1Q9UKM7 699 aa11.61□□□□□ -0.55
TPM1-229ENST00000561242 LZTS1Q9Y250 596 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms