RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 GAD1Q99259 594 aa13.18□□□□□ -0.3
IRF9-211ENST00000560852 DUSP9Q99956 384 aaKnown RBP13.18□□□□□ -0.3
IRF9-211ENST00000560852 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
IRF9-211ENST00000560852 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
IRF9-211ENST00000560852 TBC1D13Q9NVG8 400 aa13.18□□□□□ -0.3
IRF9-211ENST00000560852 MAPK8IP1Q9UQF2 711 aa13.18□□□□□ -0.3
IRF9-211ENST00000560852 LINC01553A4QN01 128 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 GRXCR1A8MXD5 290 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 TMEM189-UBE2V1I3L0A0 370 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 BIN1O00499 593 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 IKBKBO14920 756 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 CETN3O15182 167 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 SLC16A3O15427 465 aaKnown RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 UPP2O95045 317 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 CAVIN2O95810 425 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 THP07101 528 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 NR2F2P24468 414 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 LRPAP1P30533 357 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 TNFSF9P41273 254 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 PAK1Q13153 545 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 ADAM9Q13443 819 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 DPCR1Q3MIW9 517 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 COLGALT2Q8IYK4 626 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 ABI1Q8IZP0 508 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 URGCPQ8TCY9 931 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 HELQQ8TDG4 1101 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 UROC1Q96N76 676 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 ZMAT2Q96NC0 199 aaKnown RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 TSG101Q99816 390 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 BPIFA3Q9BQP9 254 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 FAM213AQ9BRX8 229 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 ZBED2Q9BTP6 218 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 GZF1Q9H116 711 aaPredicted RBP13.17□□□□□ -0.3
IRF9-211ENST00000560852 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 STK39Q9UEW8 545 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 MSRAQ9UJ68 235 aa13.17□□□□□ -0.3
IRF9-211ENST00000560852 LAMA3Q16787 3333 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 TBKBP1A7MCY6 615 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 LACTBL1A8MY62 500 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 RBAK-RBAKDNI3L0D1 243 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 CLIC2O15247 247 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 PMM2O15305 246 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 AKAP3O75969 853 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 RPL9P32969 192 aaKnown RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 BMPR1AP36894 532 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 MLH1P40692 756 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 ACOT2P49753 483 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 AP3M2P53677 418 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 TAP1Q03518 808 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 TUSC3Q13454 348 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 BTG3Q14201 252 aaPredicted RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 SPATA1Q5VX52 437 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 ISM2Q6H9L7 571 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 TMCO2Q7Z6W1 182 aaPredicted RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 CBWD2Q8IUF1 395 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 GPR65Q8IYL9 337 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 ENOX1Q8TC92 643 aaKnown RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 NELFBQ8WX92 580 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 DDX27Q96GQ7 796 aaKnown RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 ZFP42Q96MM3 310 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 NRDE2Q9H7Z3 1164 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 PARP2Q9UGN5 583 aa13.16□□□□□ -0.3
IRF9-211ENST00000560852 YBX2Q9Y2T7 364 aaKnown RBP13.16□□□□□ -0.3
IRF9-211ENST00000560852 XPOTO43592 962 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 EXOC3O60645 756 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 DDHD2O94830 711 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 GNA14O95837 355 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 ALDH2P05091 517 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 GALTP07902 379 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 CXCL8P10145 99 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 LAG3P18627 525 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 DNAJB2P25686 324 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 GTF2H1P32780 548 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 PLCB3Q01970 1234 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 PPP2R3AQ06190 1150 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 STX1AQ16623 288 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 INTS8Q75QN2 995 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 FRMD5Q7Z6J6 570 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 ZNF280BQ86YH2 543 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 WDR49Q8IV35 697 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 TGS1Q96RS0 853 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 CXCL16Q9H2A7 254 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 PCIF1Q9H4Z3 704 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 METTL14Q9HCE5 456 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
IRF9-211ENST00000560852 UBQLN1Q9UMX0 589 aaKnown RBP13.15□□□□□ -0.3
IRF9-211ENST00000560852 PLAGL2Q9UPG8 496 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms