RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 OLIG1Q8TAK6 271 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 HELQQ8TDG4 1101 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 SOCS4Q8WXH5 440 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 MTMR12Q9C0I1 747 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 L2HGDHQ9H9P8 463 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 CHORDC1Q9UHD1 332 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 PUF60Q9UHX1 559 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 NAGPAQ9UK23 515 aa11.75□□□□□ -0.53
SNRPA1-211ENST00000560433 UMODL1Q5DID0 1318 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MGAMO43451 1857 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 P4HA2O15460 535 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MAGEB2O15479 319 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 NCK2O43639 380 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 SLU7O95391 586 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 HLA-DRAP01903 254 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 CXCL8P10145 99 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 FERP16591 822 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ARF4P18085 180 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ABCB4P21439 1286 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PIK3CAP42336 1068 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 GPC3P51654 580 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MFSD10Q14728 455 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 DNAJB3Q8WWF6 145 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 OSMRQ99650 979 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 AP5M1Q9H0R1 490 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 C2orf40Q9H1Z8 148 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PPME1Q9Y570 386 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ZNF236Q9UL36 1845 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 F2P00734 622 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ABCD1P33897 745 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PRKCIP41743 596 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PHKA2P46019 1235 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 FCGRTP55899 365 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 TFAMQ00059 246 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 AMHR2Q16671 573 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ZACNQ401N2 412 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MPZL3Q6UWV2 235 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 C15orf39Q6ZRI6 1047 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 TSHZ1Q6ZSZ6 1077 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 NT5C1BQ96P26 610 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MAP7D2Q96T17 732 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 CDT1Q9H211 546 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 CXCL16Q9H2A7 254 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 APOBEC3GQ9HC16 384 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 KIAA1586Q9HCI6 787 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PTPRHQ9HD43 1115 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 RNF186Q9NXI6 227 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 PACSIN2Q9UNF0 486 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
SNRPA1-211ENST00000560433 ZNF185O15231 689 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 OGTO15294 1046 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 PHACTR2O75167 634 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 TUBB4AP04350 444 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 KRT5P13647 590 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 CXCR5P32302 372 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 TERF1P54274 439 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 MCL1Q07820 350 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 FSCN1Q16658 493 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 ERCC6LQ2NKX8 1250 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 GNASQ5JWF2 1037 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 CXCL17Q6UXB2 119 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 USP37Q86T82 979 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 CAPZA3Q96KX2 299 aa11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 CPSF3Q9UKF6 684 aaKnown RBP11.73□□□□□ -0.53
SNRPA1-211ENST00000560433 MEFVO15553 781 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 ASAP2O43150 1006 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CYP2C9P11712 490 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 PROZP22891 400 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 GTF2F1P35269 517 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 PSEN2P49810 448 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 NOP9Q86U38 636 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 EFCAB13Q8IY85 973 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 RPUSD2Q8IZ73 545 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 HES2Q9Y543 173 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 BZW2Q9Y6E2 419 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CTIFO43310 598 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 MMEP08473 750 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 AKR1A1P14550 325 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 TNFAIP3P21580 790 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CCND3P30281 292 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CPT1AP50416 773 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 MFAP3P55082 362 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CLDN10P78369 228 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 NOGQ13253 232 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 ELF2Q15723 593 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 BRSK2Q8IWQ3 736 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 TMEM40Q8WWA1 233 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 CGRRF1Q99675 332 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 PDZD7Q9H5P4 517 aa11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 PRMT7Q9NVM4 692 aaPredicted RBP11.72□□□□□ -0.53
SNRPA1-211ENST00000560433 ZEB2O60315 1214 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 ERLIN2O94905 339 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 FTCDO95954 541 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 KRT19P08727 400 aa11.71□□□□□ -0.53
SNRPA1-211ENST00000560433 NOP2P46087 812 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms