RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PARD6BQ9BYG5 372 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 KIDINS220Q9ULH0 1771 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 UBE2Q2LH0YL09 131 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 NR1D1P20393 614 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 CYP2C19P33261 490 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 NUMA1Q14980 2115 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ATF7IP2Q5U623 682 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ERO1BQ86YB8 467 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 LZICQ8WZA0 190 aa14.24□□□□□ -0.13
TRAF3-208ENST00000560371 ATP8B1O43520 1251 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 STILQ15468 1287 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ANKRD40Q6AI12 368 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 PPM1NQ8N819 430 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ATG4CQ96DT6 458 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 AFF4Q9UHB7 1163 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 IGSF9BQ9UPX0 1349 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 TTC26A0AVF1 554 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 GIPC2Q8TF65 315 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 MAPK13O15264 365 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 RTN2O75298 545 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SEC31AO94979 1220 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SKIP12755 728 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 MRPS25P82663 173 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 CDKL3Q8IVW4 592 aaPredicted RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 KLHL29Q96CT2 875 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 AAASQ9NRG9 546 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SH3BP1Q9Y3L3 701 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 CEP170BQ9Y4F5 1589 aaPredicted RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 RGS2P41220 211 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SV2CQ496J9 727 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SARM1Q6SZW1 724 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 TXLNGQ9NUQ3 528 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 TSR3Q9UJK0 312 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ZNF189O75820 626 aaPredicted RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 LIG3P49916 1009 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 TGFB2P61812 414 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 NUGGCQ68CJ6 796 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ASAP3Q8TDY4 903 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ZC3H15Q8WU90 426 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 CENPKQ9BS16 269 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ANP32DO95626 131 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 SLC8A1P32418 973 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 NLRP11P59045 1033 aaKnown RBP14.23□□□□□ -0.13
TRAF3-208ENST00000560371 KLHL38Q2WGJ6 581 aa14.23□□□□□ -0.13
TRAF3-208ENST00000560371 ATICP31939 592 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 EPM2AIP1Q7L775 607 aaPredicted RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 TMEM169Q96HH4 297 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 TRAIPQ9BWF2 469 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 NT5C1AQ9BXI3 368 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 SLITRK1Q96PX8 696 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 PHF20Q9BVI0 1012 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 PLEKHA5Q9HAU0 1116 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 SLC26A4O43511 780 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 ASMTLO95671 621 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 ACAD11Q709F0 780 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 LRRC71Q8N4P6 559 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 RFFLQ8WZ73 363 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 PITPNM3Q9BZ71 974 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 XAB2Q9HCS7 855 aaKnown RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 KRT82Q9NSB4 513 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 CPSF2Q9P2I0 782 aaKnown RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 APEX2Q9UBZ4 518 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 SUFUQ9UMX1 484 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 RGS7P49802 495 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 COL23A1Q86Y22 540 aaPredicted RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 OSBPL9Q96SU4 736 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 RIT2Q99578 217 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 WDR35Q9P2L0 1181 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 SULT1E1P49888 294 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 ZNF467Q7Z7K2 595 aaPredicted RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 TBC1D1Q86TI0 1168 aaPredicted RBP14.22□□□□□ -0.13
TRAF3-208ENST00000560371 COG4Q9H9E3 785 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 KCNH7Q9NS40 1196 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 AIPL1Q9NZN9 384 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 DOLKQ9UPQ8 538 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 C2CD2LO14523 706 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 HMBSP08397 361 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 MORF4L2Q15014 288 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 AGPAT1Q99943 283 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 KAT6AQ92794 2004 aa14.22□□□□□ -0.13
TRAF3-208ENST00000560371 SNX17Q15036 470 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 CCDC137Q6PK04 289 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 TRIM33Q9UPN9 1127 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 THPOP40225 353 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 NR1H3Q13133 447 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 CASP8Q14790 479 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 TBCCQ15814 346 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 CCNYL1Q8N7R7 359 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 STK33Q9BYT3 514 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 SLC13A1Q9BZW2 595 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 GAS2O43903 313 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 GYS1P13807 737 aa14.21□□□□□ -0.13
TRAF3-208ENST00000560371 GCLCP48506 637 aaPredicted RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 EIF3EP60228 445 aaKnown RBP14.21□□□□□ -0.13
TRAF3-208ENST00000560371 ACTR2P61160 394 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms