RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 VPS54Q9P1Q0 977 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 PPME1Q9Y570 386 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 DMXL2Q8TDJ6 3036 aa14.26□□□□□ -0.13
RABGGTA-213ENST00000560127 KIF26AQ9ULI4 1882 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 NID2Q14112 1375 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 ZMYM2Q9UBW7 1377 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 HRO43593 1189 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 KIF4AO95239 1232 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 ARF4P18085 180 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 DMWDQ09019 674 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 SIM2Q14190 667 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 N4BP2L1Q5TBK1 243 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 RNF20Q5VTR2 975 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 CEP57Q86XR8 500 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 TCP11Q8WWU5 503 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 DNASE1L2Q92874 299 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 TRIM6Q9C030 488 aaPredicted RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 GDE1Q9NZC3 331 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 VAV3Q9UKW4 847 aa14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 MRPS23Q9Y3D9 190 aaKnown RBP14.25□□□□□ -0.13
RABGGTA-213ENST00000560127 INO80B-WBP1J3KQ70 363 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 MAN2B1O00754 1011 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 FCARP24071 287 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 CCR3P51677 355 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 SHC2P98077 582 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 SATB1Q01826 763 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 MBTD1Q05BQ5 628 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 TUSC3Q13454 348 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 RAB33AQ14088 237 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 PPP2R5DQ14738 602 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 NTRK3Q16288 839 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 UVSSAQ2YD98 709 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 TSGA10IPQ3SY00 556 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 CDR2LQ86X02 465 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 IFNLR1Q8IU57 520 aaPredicted RBP14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 HACE1Q8IYU2 909 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 DDX1Q92499 740 aaKnown RBP14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 ELSPBP1Q96BH3 223 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 IER2Q9BTL4 223 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 LMAN1LQ9HAT1 526 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 XPNPEP1Q9NQW7 623 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 PARP2Q9UGN5 583 aa14.24□□□□□ -0.13
RABGGTA-213ENST00000560127 CASTOR2A6NHX0 329 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 NRG2O14511 850 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 ZBTB39O15060 712 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 B4GALT5O43286 388 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 SLC37A4O43826 429 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 NPTXRO95502 500 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 P4HBP07237 508 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 RHOP08100 348 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 CEBPBP17676 345 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 OR1D2P34982 312 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 AKAP17AQ02040 695 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 NCBP1Q09161 790 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 SRSF5Q13243 272 aaKnown RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 GAS6Q14393 721 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 GRM2Q14416 872 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 MOXD1Q6UVY6 613 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 MTRQ99707 1265 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 SLC26A6Q9BXS9 759 aa14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 RNF26Q9BY78 433 aaPredicted RBP14.23□□□□□ -0.13
RABGGTA-213ENST00000560127 CHURC1-FNTBB4DL54 471 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 M0R2N6 131 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 TM4SF5O14894 197 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 DKC1O60832 514 aaKnown RBP eCLIP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 HOXB3P14651 431 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 CPA1P15085 419 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 YWHABP31946 246 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 CXCL12P48061 93 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 FNTBP49356 437 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 NLRP5P59047 1200 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 POU5F1BQ06416 359 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 MXD4Q14582 209 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 SLC27A1Q6PCB7 646 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 RTL10Q7L3V2 364 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 MAP4K3Q8IVH8 894 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 C4orf19Q8IY42 314 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 ASAP3Q8TDY4 903 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 FAM3CQ92520 227 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 LXNQ9BS40 222 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 C22orf23Q9BZE7 217 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 CXCL16Q9H2A7 254 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 BRD9Q9H8M2 597 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 AVENQ9NQS1 362 aaPredicted RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 SETXQ7Z333 2677 aaKnown RBP14.22□□□□□ -0.13
RABGGTA-213ENST00000560127 NUP205Q92621 2012 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 A0A1B0GUA9 196 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 PTGESO14684 152 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 CHRNB1P11230 501 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 IGFBP6P24592 240 aaPredicted RBP14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 LIMK1P53667 647 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 FGD1P98174 961 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 CAPSQ13938 189 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 TFDP1Q14186 410 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 NAB2Q15742 525 aa14.21□□□□□ -0.13
RABGGTA-213ENST00000560127 XKR9Q5GH70 373 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms