RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 LRRC59Q96AG4 307 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 CEP72Q9P209 647 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 ADGRA3Q8IWK6 1321 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 E7ENQ6 273 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 HUS1O60921 280 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 PLA2G4BP0C869 781 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 DHX34Q14147 1143 aaKnown RBP14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 TAB1Q15750 504 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 BEST2Q8NFU1 509 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 GPT2Q8TD30 523 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 NDUFA13Q9P0J0 144 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 DISP3Q9P2K9 1392 aa14.56□□□□□ -0.08
CSPG4P12-202ENST00000559989 FEN1P39748 380 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 KCNK10P57789 538 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 FBXO38Q6PIJ6 1188 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 LRRC8DQ7L1W4 858 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 YAF2Q8IY57 180 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 GIMAP8Q8ND71 665 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 STKLD1Q8NE28 680 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 EPC1Q9H2F5 836 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 CTNNAL1Q9UBT7 734 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 PITPNM2Q9BZ72 1349 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 WDR36Q8NI36 951 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 FOXP3Q9BZS1 431 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 NDST4Q9H3R1 872 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 PIDD1Q9HB75 910 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 COPG2Q9UBF2 871 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 IPPQ9Y573 584 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZBTB7BO15156 539 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 ECDO95905 644 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 NME3Q13232 169 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 KIZQ2M2Z5 673 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 EFL1Q7Z2Z2 1120 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 SMAD5Q99717 465 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 CDCA7Q9BWT1 371 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 MTO1Q9Y2Z2 717 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 SH3GLB1Q9Y371 365 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 CTSWP56202 376 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 PLIN5Q00G26 463 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 AKIRIN2Q53H80 203 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 C2CD6Q53TS8 623 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 RSBN1Q5VWQ0 802 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 ESRP1Q6NXG1 681 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRIM72Q6ZMU5 477 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 CYP4Z1Q86W10 505 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF513Q8N8E2 541 aaPredicted RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 HEMGNQ9BXL5 484 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZSWIM6Q9HCJ5 1215 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 BTBD18B2RXH4 712 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 RALAP11233 206 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 RCN1Q15293 331 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 PEG10Q86TG7 708 aaKnown RBP14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 MCRS1Q96EZ8 462 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
CSPG4P12-202ENST00000559989 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 MAGEA13PA6NCF6 341 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 PIK3R1P27986 724 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 EIF2B2P49770 351 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 GSTA3Q16772 222 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RNFT2Q96EX2 444 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ELMO2Q96JJ3 720 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 CD274Q9NZQ7 290 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 F5H423 210 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 TSPAN9O75954 239 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RGS20O76081 388 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ASMTLO95671 621 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RGS2P41220 211 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 GPC3P51654 580 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 VSNL1P62760 191 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 CCDC144BQ3MJ40 725 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ATXN7L3BQ96GX2 97 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 TRPM2O94759 1503 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ADGRA2Q96PE1 1338 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 DARSP14868 501 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 TPP2P29144 1249 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 NCAPHQ15003 741 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 LRRC14Q15048 493 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 CYP4Z2PQ8N1L4 340 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 TTC39CQ8N584 583 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ECSITQ9BQ95 431 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 KLHL3Q9UH77 587 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RGS12O14924 1447 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 KPNA4O00629 521 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 YWHAZP63104 245 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 PDXDC2PQ6P474 469 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZFATQ9P243 1243 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 UHRF1BP1Q6BDS2 1440 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ATP10DQ9P241 1426 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 WARSP23381 471 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RPS7P62081 194 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 SLC39A14Q15043 492 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ARMC6Q6NXE6 501 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ZNF564Q8TBZ8 553 aaPredicted RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 HERC5Q9UII4 1024 aaKnown RBP14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 E9PBE3 544 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 GYS2P54840 703 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 ARMC4Q5T2S8 1044 aa14.54□□□□□ -0.08
CSPG4P12-202ENST00000559989 RIC8BQ9NVN3 520 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms