RNA–Protein interactions for RNA: ENST00000559891.1

TM2D3-208, Transcript of TM2 domain containing 3, humanhuman

TSL 1 (best)

Gene TM2D3, Length 2,133 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-208ENST00000559891 LRRN2O75325 713 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 TIMP1P01033 207 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 TRIM49P0CI25 452 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 TRIM49CP0CI26 452 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 RAG1P15918 1043 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 GARTP22102 1010 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 KCNJ12Q14500 433 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 DSC3Q14574 896 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 SNRNP35Q16560 246 aaKnown RBP12.59□□□□□ -0.39
TM2D3-208ENST00000559891 ERCC6LQ2NKX8 1250 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 NOTUMQ6P988 496 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 SLC27A1Q6PCB7 646 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
TM2D3-208ENST00000559891 SLC9A9Q8IVB4 645 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 C12orf56Q8IXR9 622 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 GPD1LQ8N335 351 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 CCDC127Q96BQ5 260 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 TOPORSQ9NS56 1045 aaPredicted RBP12.59□□□□□ -0.39
TM2D3-208ENST00000559891 KLK14Q9P0G3 267 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 PTPRJQ12913 1337 aa12.59□□□□□ -0.39
TM2D3-208ENST00000559891 KIAA0355O15063 1070 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 SERPINC1P01008 464 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 STAG3L1P0CL83 205 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 CXCL8P10145 99 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 EPHB4P54760 987 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 BMS1Q14692 1282 aaKnown RBP12.58□□□□□ -0.4
TM2D3-208ENST00000559891 KRT31Q15323 416 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 PLEKHG4Q58EX7 1191 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 TCP11X2Q5H9J9 407 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 C1orf220Q5T0J3 134 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 TAF3Q5VWG9 929 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 TRIM65Q6PJ69 517 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 FAM186BQ8IYM0 893 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 BADQ92934 168 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 FBXL18Q96ME1 805 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 VPS16Q9H269 839 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 MMRN2Q9H8L6 949 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 IPPQ9Y573 584 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
TM2D3-208ENST00000559891 ATF7P17544 494 aaPredicted RBP12.58□□□□□ -0.4
TM2D3-208ENST00000559891 ENOX2Q16206 610 aaKnown RBP12.58□□□□□ -0.4
TM2D3-208ENST00000559891 NFIL3Q16649 462 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 SLFN12LQ6IEE8 588 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 C16orf59Q7L2K0 433 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 LRRN4CLQ8ND94 238 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 THAP9Q9H5L6 903 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 INTS13Q9NVM9 706 aa12.58□□□□□ -0.4
TM2D3-208ENST00000559891 CPSF3Q9UKF6 684 aaKnown RBP12.58□□□□□ -0.4
TM2D3-208ENST00000559891 N4BP3O15049 544 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 OGTO15294 1046 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 EXTL3O43909 919 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 CDK11BP21127 795 aaKnown RBP12.57□□□□□ -0.4
TM2D3-208ENST00000559891 RPL13P26373 211 aaKnown RBP12.57□□□□□ -0.4
TM2D3-208ENST00000559891 PSMC2P35998 433 aaKnown RBP12.57□□□□□ -0.4
TM2D3-208ENST00000559891 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 MIIPQ5JXC2 388 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 REXO1L1PQ8IX06 675 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 GOLGA5Q8TBA6 731 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 DPF3Q92784 378 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 FAM105AQ9NUU6 356 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 DNAI1Q9UI46 699 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
TM2D3-208ENST00000559891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ARHGAP6O43182 974 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 TEX33O43247 280 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ZSCAN12O43309 604 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 RPLP2P05387 115 aaKnown RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 DLATP10515 647 aaKnown RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 MCF2P10911 925 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 SCP2P22307 547 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ABCD1P33897 745 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 CLCN6P51797 869 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 PPP3CAQ08209 521 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 SLC10A6Q3KNW5 377 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 GLRA4Q5JXX5 417 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 FOXR2Q6PJQ5 311 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 TMEM139Q8IV31 216 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ZNF516Q92618 1163 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ZFP42Q96MM3 310 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 TRIM6Q9C030 488 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 RBAKQ9NYW8 714 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 FRMD4BQ9Y2L6 1034 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 ANK1P16157 1881 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 LRRIQ3A6PVS8 624 aaPredicted RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 EVI5O60447 810 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 CXCL10P02778 98 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 AXLP30530 894 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
TM2D3-208ENST00000559891 APBA1Q02410 837 aa12.56□□□□□ -0.4
TM2D3-208ENST00000559891 CYP24A1Q07973 514 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms